Gene Information

Name : OA238_c24350 (OA238_c24350)
Accession : YP_007699952.1
Strain : Octadecabacter arcticus 238
Genome accession: NC_020908
Putative virulence/resistance : Unknown
Product : IS3 family transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2567346 - 2568131 bp
Length : 786 bp
Strand : +
Note : -

DNA sequence :
GTGGCGATTTGCAAGGTTTTGCCGATCGCGCCATCCACATATTACCACCACAAATCGATTGAGCTTGATCCTGAGAAGGC
CTCTGCCCGCGCAAAGCGCGATACCTTCTTAATGACCAAGATCCACATCTACTGGGAGAAGAGCAGGAAGCGATATGGGG
CCGTGAAAATCTGGCATGACTTGCTCGACGAGGGCACTGTAGTCGCCCGTTGCACGGTTGTTCGCCTCATGAAAAGCATG
GGAATACAGGGAATTACACGCGGTGATGTGACAACCACGAAGAGTAACCCTGCCTTGCCGTGCCCTGAAGACAAGGTGAA
CCGAAAGTTCAAGGCACCAGCACCAAACATCTTGTGGGTTGCTGACTTTACCTACGTCAGAACCGCCGTCGGCTTTGTAT
ATGTCGCGTTCATCATTGATGTCTTCGCGCGCTACATCGTTGGCTGGAAGGTCTCTTCCTCTCCCAATGCCCAGATGGTG
CTCGATGCTCTGGATCAAGCGCTAGCTGCGCGTCAACCAGATCCAAAGACCCTTATTCATCATAGCGACAGAGGCGTTCA
ATACTTGTCGATCAAATACACAGAGCGCCTTGAAGAAGCCAAAATCGATCCGTCAGTCGGCAGCGTTGGTGACAGCTACG
ACAACGCGATGGCCGAGACAATCGGTGTTTGTCAAAGGTGTTGTCCGCCGATTTCATGCGGCGTCGCTGATTTCAGGGGC
GCTGGTTTCGTTTTCTGGGTTCAACCAGACGGGACCTGCGGGTTGCCAGTTTCGGGTTTTTCTTGA

Protein sequence :
MAICKVLPIAPSTYYHHKSIELDPEKASARAKRDTFLMTKIHIYWEKSRKRYGAVKIWHDLLDEGTVVARCTVVRLMKSM
GIQGITRGDVTTTKSNPALPCPEDKVNRKFKAPAPNILWVADFTYVRTAVGFVYVAFIIDVFARYIVGWKVSSSPNAQMV
LDALDQALAARQPDPKTLIHHSDRGVQYLSIKYTERLEEAKIDPSVGSVGDSYDNAMAETIGVCQRCCPPISCGVADFRG
AGFVFWVQPDGTCGLPVSGFS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
IS629 CAI43840.1 transposase for IS629 Not tested LEE Protein 3e-42 52
ECO103_3585 YP_003223443.1 IS629 transposase OrfB Not tested LEE Protein 9e-42 52
IS629 CAC37926.1 transposase for IS629 Not tested LEE Protein 7e-42 52
IS629 CAI43821.1 transposase for IS629 Not tested LEE Protein 7e-42 52
IS629 CAI43909.1 transposase for IS629 1 Not tested LEE Protein 7e-42 52
Z1638 NP_287141.1 transposase Not tested TAI Protein 2e-43 52
Z1660 NP_287162.1 transposase for IS629 Not tested TAI Protein 1e-43 52
Z1221 NP_286756.1 transposase Not tested TAI Protein 1e-43 52
Z1198 NP_286733.1 transposase Not tested TAI Protein 2e-43 52
unnamed AAL67398.1 putative transposase Not tested PAI II CFT073 Protein 5e-44 52
ECO111_3721 YP_003236061.1 putative IS629 transposase OrfB Not tested LEE Protein 2e-43 52
ECO111_3776 YP_003236111.1 putative IS629 transposase OrfB Not tested LEE Protein 2e-43 52
ORF_34 AAZ04444.1 putative IS629 transposase Not tested PAI I APEC-O1 Protein 5e-43 51
c5178 NP_757026.1 transposase IS629 Not tested PAI II CFT073 Protein 1e-43 51
APECO1_3499 YP_854312.1 transposase for IS629 Not tested PAI I APEC-O1 Protein 7e-43 51
unnamed CAD42083.1 hypothetical protein Not tested PAI II 536 Protein 4e-42 51
c5213 NP_757061.1 transposase IS629 Not tested PAI II CFT073 Protein 1e-43 51
c5167 NP_757015.1 transposase IS629 Not tested PAI II CFT073 Protein 7e-39 50
CDCE8392_1774 YP_005134308.1 transposase-like protein Not tested Not named Protein 9e-28 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
OA238_c24350 YP_007699952.1 IS3 family transposase VFG1602 Protein 2e-42 51