Gene Information

Name : OA238_c18900 (OA238_c18900)
Accession : YP_007699454.1
Strain : Octadecabacter arcticus 238
Genome accession: NC_020908
Putative virulence/resistance : Unknown
Product : IS3 family transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1987872 - 1989065 bp
Length : 1194 bp
Strand : -
Note : -

DNA sequence :
ATGGGACAACATCGACGCAATTATACAGACGATTATAAGGCAGCTGCAGTTGAGCGGTTATATGAGCCTGGTGCGACGCA
AGGCAGCGTTGCCAAGGAGCTTGGGATCACTGGGACGCAGCTGAAGACGTGGCGCTTGGAAATTGAGGCGTTTGGCTCAG
TTGAAGCCAAACGGCGTCAGCAGGCGGATGCGGCTGAATTGCTCCACCTTCGCAAAGACAACAAGCGGCTTGCTGAGGAA
GTGGAGATTTTGCACAAAGCATCCGCTTTTTTTCGCGGCGCGGGCGGTGAAACCATGACGAACAAGCGTGCTTTCGTCAC
CGCCCATAAAGCTCAATACGCGGTTTCAATATTATGCCGTCTTCTAGAGATATCCCGGGGCTGGTTCTACGGGTTCCCAG
CCAGTCAGCCTGCACGTGATCAGCGTCAAGCTAATCGCGACGCTCGGGATCAGGCGTTGCTTCCCAAGATAAAAACCTTC
TTCAAGGCCAGTAAGAAATGTTATGGATCAAAGCGTATTCACCAAGACTTACTGGCGGATAGTGAGGTCGTCTCCGAGCG
CCGTGTTGCGAGAATAATGAAGGAACACAAGGTGTCCCCGCTTCTTCGCAAGCGTAGAAAGCCAATCACAACGGACAGCA
ATCATAAGCTGAAGCCATCCCCAAACTTGTTGGAACAGAAATTCCACAGCCAGACGCCTAATGCCGTTTGGCTGGCGGAT
ATCACCTATATCGACACGGACGAAGGCTGGCTTTATCTGGCTGGCGTGAAGGACATGACCACGCGTGAGATCGTCGGTTG
GGCGATGGAGGATCACATGCGTGCGGAGCTTTGCTGCGCCGCCCTCGAGATGGCTCTGGGACGCAGAGGCCCGGTTCCGG
GATTGATACACCACTCCGATAGGGGCGGCCAATATGCTGGCGGGGACTATCGCAAGCTGATCAAAAAGGCGAAACTCACT
CAATCCATGAGCCGCAAGGGCCAATGCCTCGACAATGCGCCGATGGAAAGCTTCTTTGCTTCATTGAAAAAGGAGATGGT
TCACCAGCGGCGCTTTAGAACACACGCTGAGGCCAAGGCCGCCATCTTCGAATACATTGAGGTCTTCTACAACCGCCAGC
GCCGTCATTCAGGCGTCGGCTACAAAACGCCAAAACAGGCTTTCGAAGATATGACTTGGAAAATGGCAGCATAG

Protein sequence :
MGQHRRNYTDDYKAAAVERLYEPGATQGSVAKELGITGTQLKTWRLEIEAFGSVEAKRRQQADAAELLHLRKDNKRLAEE
VEILHKASAFFRGAGGETMTNKRAFVTAHKAQYAVSILCRLLEISRGWFYGFPASQPARDQRQANRDARDQALLPKIKTF
FKASKKCYGSKRIHQDLLADSEVVSERRVARIMKEHKVSPLLRKRRKPITTDSNHKLKPSPNLLEQKFHSQTPNAVWLAD
ITYIDTDEGWLYLAGVKDMTTREIVGWAMEDHMRAELCCAALEMALGRRGPVPGLIHHSDRGGQYAGGDYRKLIKKAKLT
QSMSRKGQCLDNAPMESFFASLKKEMVHQRRFRTHAEAKAAIFEYIEVFYNRQRRHSGVGYKTPKQAFEDMTWKMAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
orfB AGK07090.1 IS1133 transposase; OrfB Not tested SGI1 Protein 3e-41 41
tnpA1133 ACK44540.1 TnpA Not tested SGI1 Protein 3e-41 41
orfB AGK07032.1 IS1133 transposase; OrfB Not tested SGI1 Protein 3e-41 41
unnamed AAL57519.1 transposase 1 Not tested LEE Protein 4e-37 41