Gene Information

Name : OA238_c14640 (OA238_c14640)
Accession : YP_007699069.1
Strain : Octadecabacter arcticus 238
Genome accession: NC_020908
Putative virulence/resistance : Unknown
Product : IS3 family transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1532463 - 1533362 bp
Length : 900 bp
Strand : -
Note : -

DNA sequence :
ATGACGAACAAGCGTGCTTTCGTCACCGCCCATAAAGCTCAATACGCGGTTTCAATATTATGCCGTCTTCTAGAGATATC
CCGGGGCTGGTTCTACGGGTTCCCAGCCAGTCAGCCTGCACGTGATCAGCGTCAAGCTAATCGCGACGCTCGGGATCAGG
CGTTGCTTCCCAAGATAAAAACCTTCTTCAAGGCCAGTAAGAAATGTTGTGGATCAAAGCGTATTCACCAAGACTTACTG
GCGGATAGTGAGGTCGTCTCCGAGCGCCGTGTTGCGAGAATAATGAAGGAACACAAGGTGTCCCCGCTTCTTCGCAAGCG
TAGAAAGCCAATCACAACGGACAGCAATCATAAGCTGAAGCCATCCCCAAACTTGTTGGAACAGAAATTCCACAGCCAGA
CGCCTAATGCCGTTTGGCTGGCGGATATCACCTATATCGACACGGACGAAGGCTGGCTTTATCTGGCTGGCGTGAAGGAC
ATGGCTACGCGTGAGATCGTCGGTTGGGCGATGGAGGATCACATGCGTGCGGAGCTTTGCTGCGCCGCCCTCGAGATGGC
TCTGGGACGCAGAGGCCCGGTTCCGGGATTGATACACCACTCCGATAGGGGCGGCCAATATGCTGGCGGGGACTATCGCA
AGCTGATCAAAAAGGCGAAACTCACTCAATCCATGAGCCGCAAGGGCCAATGCCTCGACAATGCGCCGATGGAAAGCTTC
TTTGCTTCATTGAAAAAGGAGATGGTTCACCAGCGGCGCTTTAGAACACACGCTGAGGCCAAGGCCGCCATCTTCGAATA
CATTGAGGTCTTCTACAACCGCCAGCGCCGTCATTCAGGCGTCGGCTACAAAACGCCAAAACAGGCTTTCGAAGATATGA
CTTGGAAAATGGCAGCATAG

Protein sequence :
MTNKRAFVTAHKAQYAVSILCRLLEISRGWFYGFPASQPARDQRQANRDARDQALLPKIKTFFKASKKCCGSKRIHQDLL
ADSEVVSERRVARIMKEHKVSPLLRKRRKPITTDSNHKLKPSPNLLEQKFHSQTPNAVWLADITYIDTDEGWLYLAGVKD
MATREIVGWAMEDHMRAELCCAALEMALGRRGPVPGLIHHSDRGGQYAGGDYRKLIKKAKLTQSMSRKGQCLDNAPMESF
FASLKKEMVHQRRFRTHAEAKAAIFEYIEVFYNRQRRHSGVGYKTPKQAFEDMTWKMAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
c3575 NP_755450.1 transposase insF Not tested PAI I CFT073 Protein 1e-42 49
Z1134 NP_286669.1 hypothetical protein Not tested TAI Protein 6e-43 49
Z1573 NP_287077.1 hypothetical protein Not tested TAI Protein 6e-43 49
hp1 AAC61713.1 Hp1 Not tested PAI I CFT073 Protein 1e-42 49
unnamed AAB86997.1 hypothetical 31 KD protein Not tested SHI-1 Protein 1e-42 49
unnamed AAQ07468.1 TnpI-like protein Not tested Not named Protein 3e-42 49
unnamed AAF09022.1 unknown Not tested SHI-O Protein 5e-43 48
unnamed AAF09030.1 unknown Not tested SHI-O Protein 1e-42 48
tnpI AAD44751.1 TnpI Not tested SHI-2 Protein 1e-42 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
OA238_c14640 YP_007699069.1 IS3 family transposase VFG1706 Protein 6e-43 49