Gene Information

Name : OA238_c14350 (OA238_c14350)
Accession : YP_007699044.1
Strain : Octadecabacter arcticus 238
Genome accession: NC_020908
Putative virulence/resistance : Unknown
Product : DNA integration/recombination/inversion protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1497919 - 1499142 bp
Length : 1224 bp
Strand : -
Note : prophage integrase-like

DNA sequence :
ATGGCGGACGCAAATCAGGAAATCGAACGGACCGAACCGAACAAGCACCCTAACAAGGCGCTGTCGGCAGCATTCGTCCG
CACAGCGACCACACCCGGCAAATACAACGACGGTCACGGTCTGTTTCTCAAAGTAGTTACTTCAGGCGCAAAGCGTTGGG
TTCAACGCATTGTGGTTCGTGGCAAGCGAACCGAGATTGGATTAGGCAGTGCATCTCTTGTGAGCCTAGCAGAGGCGCGG
GAAACGGCGTTGGAGAACCGCAAGCTGGCCCGTGCAGGCGGAGACCCGCTACAGGCTAAACGCACCTCAGAGGCGCTGCT
GACGTTTGAGGAAGCATCCCGCAAGGTCCACAAAATCCATGAACCAACATGGCGCAACAAAAAACACGCCGCTCAATTCC
TCTCTACTTTAGAGACATATACCTTCCCCCGCATGAGCAATCTTAAGGTATCAGAGGTCACAACGGCGGACGTGCTGGCT
GTGTTGCAACCAATCTGGCTTGAAAAGCCCGAAACTGCCAAACGGGTTCGCCAACGTATCGGCACGGTCATGAAGTGGGC
TGTTGCGAACGGCTGGAGACAGGACAACCCAGCGGGGGCAATTTCGCAAGCACTGCCCAAACAGAAACAACCCGTGAAGC
ACCGTAAATCCTTGCCGTACGATGAGGTTTCAGGCTGTCTGGTTGCTGTTCGCAGCTCCCGTGCGTTCAATGCCACCAAA
CTTGCACTAGAGCTCACTGTTTTGACCGCCTGTCGGTCTGGCGAGGTGCGCTTGGCCGAATGGTCAGAGATTGATCTCGC
GAAGGCAGAATGGACCATCCCCGCCCAGCGCATGAAAGCAAGCAAAGAACACCGCATCCCCCTGTCAGGCCGCGCTGTCG
AAGTATTAGAAGCAGCCAAGGCGCTGGACGATGGAACTGGATTGGTTTTCCCAAGCACCACGGGCAACCCGCTGTCAGAT
ATGACTCTATCGAAGTTGGTCAAAGGGCTTGGATATGACGTGGACGTTCACGGGTTCCGTACGTCCTTCAAAACTTGGTG
TCAGGAACGCACCACCACCGCCCGCGAAGTGTCGGAGGCAGCATTGGCACATAGTATTCAGAATAAGGCAGAGGCGGCCT
ATGCGAGGTCTGACTTGTTTGAAAAGCGTAGAAAACTGATGGAACAATGGAGTTGCTTCGTTGCTGAGCCTTCGAGCGCG
GTTCTTGTTAGGATAGCTAAATGA

Protein sequence :
MADANQEIERTEPNKHPNKALSAAFVRTATTPGKYNDGHGLFLKVVTSGAKRWVQRIVVRGKRTEIGLGSASLVSLAEAR
ETALENRKLARAGGDPLQAKRTSEALLTFEEASRKVHKIHEPTWRNKKHAAQFLSTLETYTFPRMSNLKVSEVTTADVLA
VLQPIWLEKPETAKRVRQRIGTVMKWAVANGWRQDNPAGAISQALPKQKQPVKHRKSLPYDEVSGCLVAVRSSRAFNATK
LALELTVLTACRSGEVRLAEWSEIDLAKAEWTIPAQRMKASKEHRIPLSGRAVEVLEAAKALDDGTGLVFPSTTGNPLSD
MTLSKLVKGLGYDVDVHGFRTSFKTWCQERTTTAREVSEAALAHSIQNKAEAAYARSDLFEKRRKLMEQWSCFVAEPSSA
VLVRIAK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z1120 NP_286655.1 P4 family integrase Not tested TAI Protein 1e-56 42
Z1559 NP_287063.1 P4 family integrase Not tested TAI Protein 1e-56 42
int AAL08426.1 integrase Not tested SRL Protein 2e-56 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
OA238_c14350 YP_007699044.1 DNA integration/recombination/inversion protein VFG0672 Protein 1e-56 42