Gene Information

Name : OA238_c14060 (OA238_c14060)
Accession : YP_007699018.1
Strain : Octadecabacter arcticus 238
Genome accession: NC_020908
Putative virulence/resistance : Unknown
Product : IS3 family transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1465250 - 1465909 bp
Length : 660 bp
Strand : +
Note : -

DNA sequence :
ATGACCGAAGAACTGAAAGAGATTGGTCTGAACGTCGGGCACCGTCGCGTGGGCCGTTTGATGCGCCAGAACGGTATCTC
TGTAGTTAGAACGCGCAAACACAAGGTAACGACGGACAGTAACCACAAGTTCAACATCGCCCCGAACCTTCTGGATCGCA
ACTTCTCAACAGATCAGCCAAACAAGAAATGGGCAGGTGACATTACCTATATCTGGACCCGCGAAGGCTGGCTGTATCTT
GCGGTGATCCTGGACTTACATTCACGCCGTGTCATTGGTTGGGCCGTCAGCAATCGGATGAAGCGTGACCTTGCGATCCG
AGCACTGGAAATGGCAATCGCCTTCAGGGCACGGTCCAAAGGATGCATCCATCATACGGATCGCGGCAGCCAATACTGTT
CCCATGATTACCAGAAGATCCTGCGCCAACATGATTTTAAAGTGTCGATGAGCGGCAAGGGAAATTGCTATAACAACGCC
GCCTTTGAAACGTTCTTCAAAACCATCAAGGCCGAACTGATCTGGCGAGACACATGGAACACACGCAGACACGCTGAGAT
GGCGATCTTCGAATACATCAACGGCTTCTACAATCCGCGTCGCCGCCACTCAGCACTGGGCTGGAAAAGCCCCGTCGCTT
TCGAACGCAAGGTGGCTTAA

Protein sequence :
MTEELKEIGLNVGHRRVGRLMRQNGISVVRTRKHKVTTDSNHKFNIAPNLLDRNFSTDQPNKKWAGDITYIWTREGWLYL
AVILDLHSRRVIGWAVSNRMKRDLAIRALEMAIAFRARSKGCIHHTDRGSQYCSHDYQKILRQHDFKVSMSGKGNCYNNA
AFETFFKTIKAELIWRDTWNTRRHAEMAIFEYINGFYNPRRRHSALGWKSPVAFERKVA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
orfB AGK07090.1 IS1133 transposase; OrfB Not tested SGI1 Protein 5e-77 74
tnpA1133 ACK44540.1 TnpA Not tested SGI1 Protein 5e-77 74
orfB AGK07032.1 IS1133 transposase; OrfB Not tested SGI1 Protein 5e-77 74
hp1 AAC61713.1 Hp1 Not tested PAI I CFT073 Protein 5e-40 46
unnamed AAF09022.1 unknown Not tested SHI-O Protein 4e-40 46
c3575 NP_755450.1 transposase insF Not tested PAI I CFT073 Protein 7e-40 46
unnamed AAB86997.1 hypothetical 31 KD protein Not tested SHI-1 Protein 4e-40 46
Z1134 NP_286669.1 hypothetical protein Not tested TAI Protein 6e-40 46
unnamed AAF09030.1 unknown Not tested SHI-O Protein 4e-40 46
Z1573 NP_287077.1 hypothetical protein Not tested TAI Protein 6e-40 46
tnpI AAD44751.1 TnpI Not tested SHI-2 Protein 4e-40 46
ECO111_3732 YP_003236068.1 putative IS3 transposase InsF Not tested LEE Protein 4e-39 46
unnamed AAL57581.1 transposase 1 Not tested LEE Protein 5e-39 46
unnamed AAL57519.1 transposase 1 Not tested LEE Protein 5e-39 46
unnamed AAQ07468.1 TnpI-like protein Not tested Not named Protein 2e-39 45
insF CAC43414.1 transposase of insertion element IS3 Not tested PAI III 536 Protein 1e-38 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
OA238_c14060 YP_007699018.1 IS3 family transposase VFG1706 Protein 2e-40 46
OA238_c14060 YP_007699018.1 IS3 family transposase VFG1631 Protein 5e-39 45