Gene Information

Name : OA238_c13850 (OA238_c13850)
Accession : YP_007698998.1
Strain : Octadecabacter arcticus 238
Genome accession: NC_020908
Putative virulence/resistance : Resistance
Product : putative multidrug resistance protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1447367 - 1447702 bp
Length : 336 bp
Strand : -
Note : -

DNA sequence :
ATGCCCGCACATTTCATCACCCTCATCGTCGCCGTTATCTTTGAAACCATCGGCACCACAGCCCTTCAGGCCAGCCAACA
GTTTAGAAAGCTGGGTCCGTCTATCATCGTCGTGATCGCCTACGCCGCAGCGTTCTATTTGTTGGCCCTGACGCTGAAAA
CGATGCCCGTCGGCATCATGTACGCGATTTGGTCAGGATCGGGCATTGTGCTGATCGCAGTGATCGGCTGGGTGGTGTTT
CGCCAAACGCTCGACTGGCCCGCGGTTCTTGGTATGGCGTTGATCCTTGCAGGAATTGTCATCATCCAAATGTTCTCAAA
ATCAGCGACCCACTAA

Protein sequence :
MPAHFITLIVAVIFETIGTTALQASQQFRKLGPSIIVVIAYAAAFYLLALTLKTMPVGIMYAIWSGSGIVLIAVIGWVVF
RQTLDWPAVLGMALILAGIVIIQMFSKSATH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
qacE-delta1 ACY75523.1 QacE-delta1 Not tested Tn6060 Protein 2e-10 47
qacEdelta1 AAK02056.1 quaternary ammonium compound and disinfectant protein Not tested SGI1 Protein 2e-10 47
qacEdelta1 AGK06970.1 QacEdelta1 Not tested SGI1 Protein 2e-10 47
qacE-delta1 ACY75532.1 QacE-delta1 Not tested Tn6060 Protein 2e-10 47
qacEdelta1 ABB48428.1 QacEdelta1 Not tested SGI1 Protein 2e-10 47
qacEdelta1 AGK06979.1 QacEdelta1 Not tested SGI1 Protein 2e-10 47
qacE-delta1 AET25389.1 QacE-delta1 Not tested PAGI-2(C) Protein 2e-10 47
qacEdelta1 ABZ01839.1 QacEdelta1 Not tested SGI2 Protein 2e-10 47
ACICU_00227 YP_001844886.1 membrane transporter Not tested AbaR20 Protein 2e-10 47
qacEdelta1 AGK07016.1 QacEdelta1 Not tested SGI1 Protein 2e-10 47
qacE-delta1 AFG30112.1 QacE-delta1 Not tested PAGI-2 Protein 2e-10 47
qacEdelta1 CAJ77030.1 Quaternary ammonium compound-resistance protein Not tested AbaR1 Protein 2e-10 47
qacEdelta1 YP_005797134.1 quaternary ammonium compound-resistance protein Not tested AbaR4e Protein 2e-10 47
qacEdelta1 AGK07074.1 QacEdelta1 Not tested SGI1 Protein 2e-10 47
qacEdelta1 AGF34989.1 QacEdelta1 Not tested SGI1 Protein 2e-10 47
qacEdelta1 CAJ77049.1 Quaternary ammonium compound-resistance protein Not tested AbaR1 Protein 2e-10 47
qacEdelta1 YP_005797150.1 quaternary ammonium compound-resistance protein Not tested AbaR4e Protein 2e-10 47
qacEdelta1 AGK07100.1 QacEdelta1 Not tested SGI1 Protein 2e-10 47
qacEdelta1 AGF35028.1 QacEdelta1 Not tested SGI1 Protein 2e-10 47
qacEdelta1 CAJ77052.1 Quaternary ammonium compound-resistance protein Not tested AbaR1 Protein 2e-10 47
ebr YP_006098377.1 putative ethidium bromide resistance protein Not tested Tn2411 Protein 2e-10 47
qacEdelta1 AGK07109.1 QacEdelta1 Not tested SGI1 Protein 2e-10 47
qacEdelta1 CAJ77088.1 Quaternary ammonium compound-resistance protein Not tested AbaR1 Protein 2e-10 47
qacEdelta1 ACN81026.1 QacEdelta1 Not tested AbaR5 Protein 2e-10 47
qacEdelta1 AFV53123.1 QacEdelta1 multidrug exporter Not tested AbGRI2-1 Protein 2e-10 47
qacEdelta1 AGF35063.1 QacEdelta1 Not tested SGI1 Protein 2e-10 47
qacE-deltal ACF06159.1 quartenary ammonium compound resistance protein Not tested Tn5036-like Protein 2e-10 47
qacEdelta1 AAK02047.1 quaternary ammonium compound and disinfectant protein Not tested SGI1 Protein 2e-10 47
qacEdelta1 AGK36647.1 QacEdelta1 Not tested AbaR26 Protein 2e-10 47
qacEdelta1 AGK06933.1 QacEdelta1 Not tested SGI1 Protein 2e-10 47

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
OA238_c13850 YP_007698998.1 putative multidrug resistance protein NC_010410.6003348.p0 Protein 6e-18 58
OA238_c13850 YP_007698998.1 putative multidrug resistance protein BAC0002 Protein 6e-18 58
OA238_c13850 YP_007698998.1 putative multidrug resistance protein CP004022.1.gene1549. Protein 6e-16 51
OA238_c13850 YP_007698998.1 putative multidrug resistance protein BAC0150 Protein 2e-12 50
OA238_c13850 YP_007698998.1 putative multidrug resistance protein NC_002695.1.913273.p Protein 2e-12 50
OA238_c13850 YP_007698998.1 putative multidrug resistance protein CP001138.1.gene1489. Protein 2e-16 50
OA238_c13850 YP_007698998.1 putative multidrug resistance protein BAC0377 Protein 5e-17 49
OA238_c13850 YP_007698998.1 putative multidrug resistance protein BAC0324 Protein 2e-13 48
OA238_c13850 YP_007698998.1 putative multidrug resistance protein BAC0322 Protein 1e-14 47
OA238_c13850 YP_007698998.1 putative multidrug resistance protein BAC0323 Protein 7e-11 47
OA238_c13850 YP_007698998.1 putative multidrug resistance protein BAC0139 Protein 2e-08 43
OA238_c13850 YP_007698998.1 putative multidrug resistance protein BAC0192 Protein 5e-10 43