Gene Information

Name : OA238_c13080 (OA238_c13080)
Accession : YP_007698932.1
Strain : Octadecabacter arcticus 238
Genome accession: NC_020908
Putative virulence/resistance : Unknown
Product : IS3 family transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1366696 - 1367520 bp
Length : 825 bp
Strand : +
Note : -

DNA sequence :
ATGACGAACAAGCGTGCTTTCGTCACCGCCCATAAAGCTCAATACGCGGTTTCAATATTATGCCGTCTTCTAGAGATATC
CCGGGGCTGGTTCTACGGGTTCCCAGCCAGTCAGCCTGCACGTGATCAGCGTCAAGCTAATCGCGACGCTCGGGATCAGG
CGTTGCTTCCCAAGATAAAAACCTTCTTCAAGGCCAGTAAGAAATGTTGTGGATCAAAGCGTATTCACCAAGACTTACTG
GCGGATAGTGAGGTCGTCTCCGAGCGCCGTGTTGCGAGAATAATGAAGGAACACAAGGTGTCCCCGCTTCTTCGCAAGCG
TAGAAAGCCAATCACAACGGACAGCAATCATAAGCTGAAGCCATCCCCAAACTTGTTGGAACAGAAATTCCACAGCCAGA
CGCCTAATGCCGTTTGGCTGGCGGATATCACCTATATCGACACGGACGAAGGCTGGCTTTATCTGGCTGGCGTGAAGGAC
ATGGCTACGCGTGAGATCGTCGGTTGGGCGATGGAGGATCACATGCGTGCGGAGCTTTGCTGCGCCGCCCTCGAGATGGC
TCTGGGACGCAGAGGCCCGGTTCCGGGATTGATACACCACTCCGATAGGGGCGGCCAATATGCTGGCGGGGACTATCGCA
AGCTGATCAAAAAGGCGAAACTCACTCAATCCATGAGCCGCAAGGGCCAATGCCTCGACAATGCGCCGATGGAAAGCTTC
TTTGCTTCATTGAAAAAGGAGATGGTTCACCAGCGGCGCTTTAGAACACACGCTGAGGCCAAGGCCGCCATCTTCGAATA
CATTGAGGTCTTCTACAACCGCTAG

Protein sequence :
MTNKRAFVTAHKAQYAVSILCRLLEISRGWFYGFPASQPARDQRQANRDARDQALLPKIKTFFKASKKCCGSKRIHQDLL
ADSEVVSERRVARIMKEHKVSPLLRKRRKPITTDSNHKLKPSPNLLEQKFHSQTPNAVWLADITYIDTDEGWLYLAGVKD
MATREIVGWAMEDHMRAELCCAALEMALGRRGPVPGLIHHSDRGGQYAGGDYRKLIKKAKLTQSMSRKGQCLDNAPMESF
FASLKKEMVHQRRFRTHAEAKAAIFEYIEVFYNR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnpI AAD44751.1 TnpI Not tested SHI-2 Protein 2e-39 50
unnamed AAB86997.1 hypothetical 31 KD protein Not tested SHI-1 Protein 2e-39 50
hp1 AAC61713.1 Hp1 Not tested PAI I CFT073 Protein 1e-39 50
c3575 NP_755450.1 transposase insF Not tested PAI I CFT073 Protein 2e-39 50
Z1134 NP_286669.1 hypothetical protein Not tested TAI Protein 8e-40 50
Z1573 NP_287077.1 hypothetical protein Not tested TAI Protein 8e-40 50
unnamed AAF09030.1 unknown Not tested SHI-O Protein 2e-39 50
unnamed AAQ07468.1 TnpI-like protein Not tested Not named Protein 5e-39 50
unnamed AAF09022.1 unknown Not tested SHI-O Protein 7e-40 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
OA238_c13080 YP_007698932.1 IS3 family transposase VFG1706 Protein 8e-40 50