Gene Information

Name : SHJGH_6259 (SHJGH_6259)
Accession : YP_007695256.1
Strain : Streptomyces hygroscopicus TL01
Genome accession: NC_020895
Putative virulence/resistance : Virulence
Product : pyruvate kinase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 7084931 - 7086304 bp
Length : 1374 bp
Strand : -
Note : -

DNA sequence :
ATGCTCGTCGCCATGATCGAGGCGGGCATGAACGTGGCCCGGTTCAACTTCAGCCACGGCACCCACGCCGAGCACCAGGC
GCGGTACGACCGCGTCCGGGCCGCCTCCAAGGAGACCGGCCGCCCCATCGGCGTCCTCGCCGACCTCCAGGGCCCGAAGA
TCCGCCTGGAGACCTTCGCCGAGGGTCCGGTCGAGCTGGAGCGCGGTGACGAGTTCGTCATCACGACCGAGGACGTGCCG
GGTGACAAGCACATCTGCGGCACGACGTACAAGGGGCTGCCGGGTGACGTCTCGCGCGGCGACCAGGTCCTGATCAACGA
CGGCAACGTCGAGCTGAAGGTCCTGGACGTCGAGGGCCCGCGGGTGAAGACGATCGTCATCGAGGGCGGTGTCGTCTCCG
ACCACAAGGGCATCAACCTGCCCGGCACGGCCGTCAACGTGCCCGCGCTGAGCGAGAAGGACGTCGAGGACCTGCGCTTC
GCCCTCCGCATGGGCTGCGACCTGGTCGCGCTGTCCTTCGTCCGGGACGCCAAGGACATCCACGACGTCCACCGCGTCAT
GGACGAGGAGGGCCGCCGCGTCCCCGTCATCGCCAAGGTGGAGAAGCCGCAGGCGGTGGAGAACATGGAGGACGTCGTGA
TGGCGTTCGACGGCGTGATGGTCGCCCGCGGTGACCTCGCCGTCGAGTACCCGCTCGAAAAGGTCCCCATGGTGCAGAAG
CGCCTGATCGAGCTGTGCCGGCGCAACGCCAAGCCGGTGATCGTCGCGACCCAGATGATGGAGTCGATGATCACCAACTC
GCGTCCGACCCGCGCCGAGGCCTCCGACGTCGCCAACGCGATCCTGGACGGCACCGACGCGGTCATGCTGTCGGCCGAGT
CCAGCGTGGGCGCGTACCCGGTCGAGACGGTCAAGACCATGTCGAAGATCGTCACCGCGGCCGAGCAGGAGCTGCTCTCC
AAGGGCCTCCAGCCCCTCGTCCCCGGCAAGAAGCCGCGTACGCAGGGCGGTTCGGTGGCCCGTGCCGCCGCCGAGATCGC
CGACTTCCTCGGCGCCAAGGGCCTGGTCGCCTTCACGCAGTCCGGTGACACCGCGCGCCGCCTCTCCCGCTACCGCGCGA
TCCAGCCGATCATCGCCTTCACCACGGACGAGGGCACCCGCAACCAGCTCACCCTGAGCTGGGGCGTGGAGTCGCACGTC
GTGCCGTTCGTGAACACCACCGACGAGATGGTCGACCTGGTGGACCAGGAGGTCGACCGGCTCAGCCGTTTCGAGCGGGG
CGACACCCTCATCATCACCGCCGGCTCGCCCCCCGGGGTCCCCGGCACCACCAACATGCTCCGCGTCCACCACCTGGGCA
CCCAGAGCAACTGA

Protein sequence :
MLVAMIEAGMNVARFNFSHGTHAEHQARYDRVRAASKETGRPIGVLADLQGPKIRLETFAEGPVELERGDEFVITTEDVP
GDKHICGTTYKGLPGDVSRGDQVLINDGNVELKVLDVEGPRVKTIVIEGGVVSDHKGINLPGTAVNVPALSEKDVEDLRF
ALRMGCDLVALSFVRDAKDIHDVHRVMDEEGRRVPVIAKVEKPQAVENMEDVVMAFDGVMVARGDLAVEYPLEKVPMVQK
RLIELCRRNAKPVIVATQMMESMITNSRPTRAEASDVANAILDGTDAVMLSAESSVGAYPVETVKTMSKIVTAAEQELLS
KGLQPLVPGKKPRTQGGSVARAAAEIADFLGAKGLVAFTQSGDTARRLSRYRAIQPIIAFTTDEGTRNQLTLSWGVESHV
VPFVNTTDEMVDLVDQEVDRLSRFERGDTLIITAGSPPGVPGTTNMLRVHHLGTQSN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pykA NP_273151.1 pyruvate kinase Not tested IHT-A Protein 6e-65 43
STY1744 NP_456147.1 pyruvate kinase Not tested SPI-2 Protein 2e-72 42
pykF YP_216386.1 pyruvate kinase Not tested SPI-2 Protein 2e-72 42
pykF NP_805051.1 pyruvate kinase Not tested SPI-2 Protein 2e-72 42
pykF CAA68205.1 pyruvate kinase like protein Not tested SPI-2 Protein 4e-72 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SHJGH_6259 YP_007695256.1 pyruvate kinase VFG0479 Protein 7e-73 42