Gene Information

Name : SHJGH_6040 (SHJGH_6040)
Accession : YP_007695037.1
Strain : Streptomyces hygroscopicus TL01
Genome accession: NC_020895
Putative virulence/resistance : Unknown
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 6836873 - 6838510 bp
Length : 1638 bp
Strand : +
Note : -

DNA sequence :
ATGAGCCTGGTGGAAGCGGCGGACACGAGCGTGGACGCGGCGGACAACAGCCTGGTGGACGTGACGGACCTGACCGTCGA
GTTCGGCGCCCTGCGCGCCGTCGACGGGCTCTCCTTCCGCCTGGCGAAGGGCGCCGCCCTCGCCCTGGTCGGCGAGTCCG
GCTCCGGCAAGTCCACGGTCGCGGGCGCCCTGCTGGGCCTGCACCGGGGCACCGGAGCCCGGGTCGGCGGCTCGGTGCGG
GTGGCCGGCACCGACGTACAGGCGGCCTCCGACGAGGAGCTGCGCCGGCTGCGCGGCGCCAAGGCCGCCATGGTCTTCCA
GGACCCGCTGTCCTCGCTCGACCCGTACTACGCCATCGGCGACCAGATCGCCGAGGTCTACCGCGTCCACACGCGCGTGT
CGCGCCGTGCCGCACGCGCGCGTGCCGTCGAGGTGCTGGAGCGGGTGGGGATCCCGGACGCGGCACGGCGGTCCCGGTCC
CGGCCGCACGAGTTCAGCGGCGGCATGCGCCAGCGCGCCCTCATCGCCATGGCCCTCGCCTGCGCGCCAGACCTGCTGAT
CGCCGACGAGCCGACCACCGCCCTCGACGTCACCGTCCAGGCCCAGATCCTCGACCTGCTGCACGGGCTGCGTGAGGAGA
CCGGCATGGGCCTGCTGCTCGTCACCCACGACGTGGGCGTGGCCGCCGAGAGCGTGGACGACGTCCTCGTCATGCGGCAG
GGCCGGGCCGTCGAGCGCGGCCCGGTGGGCGCGATCCTCGCGGCACCCGCCGAGCCCTACACCCGGGAGCTCCTCGACGC
CGTCCCGCGCGTGGACGCCCGCCGCACCGGCTCCCCGGCCGGCGACGAGGTCGTGCTGGAGGCCACCGGAGTACGGCGCG
AGTTCGGGCGCGGCAAGCGGGCGTTCGCGGCCGTGGACGACGTCTCGGTGACCGTCCGGCGCGGGGAGACCCTCGGCGTG
GTCGGCGAGAGCGGCAGCGGCAAGACCACGCTCGGCCGCATGCTCGTCGGGCTGCTGGAGCCGACCGCCGGGGAGATCCG
CTACGAAGGGCGCCCGCACACCGGCGTGAACCCGTCCGTCCAGATGGTCTTCCAGGACCCCGTCTCCTCCCTCAACCCGC
GCCGCAGCGTGGGCGAGTCCATCGCCGACCCGCTCCGCGCGCGCGGCGAACGGGACGAGGCGCGCATCCGGGGGCGCGTG
ACCGAACTGCTGGAGCGCGTGGGGCTCGAAGGGGCGCACTACGACCGGTACCCGCACGAGTTCAGCGGCGGACAGCGCCA
GCGGATCGGCATCGCGCGGGCGCTCGCCGCGGAGCCGCGCGCCATCGTCTGCGACGAGCCCGTCTCCGCGCTGGACGTCA
CCACGCAGGCGCAGGTGGTCGCCCTGCTCGGCGAACTCCAGCGGGAGCTCGGCCTCGCGCTGGTGTTCATCGCGCACGAC
CTCGCCGTCGTCCGCCAGGTCAGCGACCGGGTCGCGGTGATGCGGCGCGGCCGGCTCGTCGAGTACGGGCCCGCCGACGA
GGTGTACGACAGCCCGCGCGAGCCGTACACCAAGCAGCTCCTGGCCGCCGTACCCGCGCTCGACCCGGAACTGGCGGCCC
GGCGGCGCGCCGCCCGGCGCGAACCGGCAGCGGTGTAG

Protein sequence :
MSLVEAADTSVDAADNSLVDVTDLTVEFGALRAVDGLSFRLAKGAALALVGESGSGKSTVAGALLGLHRGTGARVGGSVR
VAGTDVQAASDEELRRLRGAKAAMVFQDPLSSLDPYYAIGDQIAEVYRVHTRVSRRAARARAVEVLERVGIPDAARRSRS
RPHEFSGGMRQRALIAMALACAPDLLIADEPTTALDVTVQAQILDLLHGLREETGMGLLLVTHDVGVAAESVDDVLVMRQ
GRAVERGPVGAILAAPAEPYTRELLDAVPRVDARRTGSPAGDEVVLEATGVRREFGRGKRAFAAVDDVSVTVRRGETLGV
VGESGSGKTTLGRMLVGLLEPTAGEIRYEGRPHTGVNPSVQMVFQDPVSSLNPRRSVGESIADPLRARGERDEARIRGRV
TELLERVGLEGAHYDRYPHEFSGGQRQRIGIARALAAEPRAIVCDEPVSALDVTTQAQVVALLGELQRELGLALVFIAHD
LAVVRQVSDRVAVMRRGRLVEYGPADEVYDSPREPYTKQLLAAVPALDPELAARRRAARREPAAV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
oppDF2 YP_005686002.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 9e-80 45
oppDF2 YP_005681814.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 9e-80 45
oppDF2 YP_005683914.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 9e-80 45
cpfrc_01561 YP_003783961.1 hypothetical protein Not tested PiCp 6 Protein 9e-80 45
dppD YP_005160017.1 putative peptide ABC transport system ATP-binding protein Not tested Not named Protein 1e-88 44