Gene Information

Name : SHJGH_5814 (SHJGH_5814)
Accession : YP_007694811.1
Strain : Streptomyces hygroscopicus TL01
Genome accession: NC_020895
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 6591764 - 6592447 bp
Length : 684 bp
Strand : +
Note : -

DNA sequence : 
ATGTACGAACTGAACAACGTCACCAAGCGCTACACCCGGGGCAAGGACACCGTCCACGCCCTCGACGGAATCGACCTCAC
CATCCCCGACGGGGACCGGCTCGTCATCCAGGGCCCCACCGGCGGCGGAAAGTCCACGCTCCTCCAGATGCTCGGCGGCC
TCGACCGCCCCACCTCCGGCGAAGTCGTCCTGGACGGCACCGACCTGGCCAGGCTGGGCGAGGCCCGGCTGACCAGGGTC
CGCAGCGAGAGCATCGGCTTCGTCTTCCAGTCCTTCAACCTCATCCCGACCCTCACCGCCCAGGAGAACGTGGAAACCGC
CCTCGTCCCCCTCGGCATCAAGGTGAGGGAACGCCGTGAACTCGCCGCGGAGGCCCTTCGGTCCGTCGGCCTGGGCGAGC
GCCTCGGACATCTCCCCGGCGAGATGTCCGGAGGGCAGCAGCAGCGCGTCGCCATCGCCCGGGCCGTCGTGAAGAAACCC
AAGGTGCTGCTGGCCGACGAGCCGACCGGCAACCTGGACGAGGGAACGCGGGACGAGATCATGGACGTACTCGAACGCCT
CTGGAAGGAGCACGGGCTGACCTTCATCATGGTCACCCACGACTCCGCACTGGCGAAGAAGGCTCCGCGCCTGGCCACAC
TGCGCAAGGGGAAGATCACAGTGAAGGAGAACGCGGCCACCTGA

Protein sequence : 
MYELNNVTKRYTRGKDTVHALDGIDLTIPDGDRLVIQGPTGGGKSTLLQMLGGLDRPTSGEVVLDGTDLARLGEARLTRV
RSESIGFVFQSFNLIPTLTAQENVETALVPLGIKVRERRELAAEALRSVGLGERLGHLPGEMSGGQQQRVAIARAVVKKP
KVLLADEPTGNLDEGTRDEIMDVLERLWKEHGLTFIMVTHDSALAKKAPRLATLRKGKITVKENAAT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 4e-27 41
opuBA YP_005124363.1 choline transport system ATP-binding protein Not tested Not named Protein 7e-20 41
opuBA NP_938494.1 choline transport system ATP-binding protein Not tested Not named Protein 6e-20 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SHJGH_5814 YP_007694811.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 5e-41 49
SHJGH_5814 YP_007694811.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 9e-34 48
SHJGH_5814 YP_007694811.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 2e-36 43