Gene Information

Name : SHJGH_4880 (SHJGH_4880)
Accession : YP_007693877.1
Strain : Streptomyces hygroscopicus TL01
Genome accession: NC_020895
Putative virulence/resistance : Unknown
Product : seryl-tRNA synthetase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5556368 - 5557606 bp
Length : 1239 bp
Strand : +
Note : -

DNA sequence :
GTGCGCGCGTCCCAGCGCGCCCGTGGAGAGGACGTCGCGCTCGTCGACGCCCTCCTGTCTGCCGACGAGCGGCGCAGGTC
CTCCGGCGTCCGCTTCGACGAGCTGCGCGCCGAGCAGAAGCAGCTCGGCAAGCTGATCCCCAAGGCCGGCGCCGAGGAGA
AGGCCGAGCTGCTGGGGCGCGCCGAGCAGCTGAAGGCGGACGTGAAGGCCGCCGAGGCCGAGCGCGACGCCGCCGACGCC
GAGACGCAGGAACTGCTGCTCAAGCTCGGCAACCTCGTCCACCCCGACGTGCCCGTCGGCGGCGAGGAGGACTTCGCCAC
GCTGGAGACGCACGGCACGATCCGCGACTTCGGTGCCGAGGGCTTCGAGCCCAAGGACCACCTGGAGCTGGGCCAGCTGC
TCGGCGCGATCGACGTCGAGCGCGGCGCCAAGGTCTCCGGCTCCCGCTTCTACTTCCTCACCGGTGTCGGCGCCCTGCTG
GAGCTGGCCCTGGTGAACGCGGCGATCGCCCAGGCCACCGCCGCCGGCTTCACGCCGATGCTCACCCCGGCGCTGGTCCG
CCCGCAGTCCATGGCCGGCACCGGCTTCCTCGGCCAGGCCGCCCAGGACGTCTACCACCTCGACAAGGACGACCTGTACC
TGGTCGGCACCTCCGAGGTCCCGCTCGCGGCCTACCACATGGACGAGATCATCGACGCGGACCGGCTGCCGCTGCGGTAC
GCGGGCTTCTCCCCGTGCTTCCGCCGCGAGGCCGGCTCGCACGGCAAGGACACCCGGGGCATCTTCCGCGTGCACCAGTT
CGACAAGGTCGAGATGTTCTCGTACGTCGCTCCCGAGGACTCGCAGGCCGAGCACCAGCGCCTGCTGGAGTGGGAGAAGC
AGTGGCTGACCTCGCTGGAGCTGCCGTTCCGCGTCATCGACGTGGCCTCCGGCGACCTCGGCTCCTCGGCCGCGCGCAAG
TTCGACTGCGAGGCGTGGATCCCGACCCAGGGCAAGTACCGCGAGCTGACCTCGACCTCGGACTGCACCGAGTTCCAGGC
CCGCCGGCTGTCCATCCGGGTCCGCGACGGCAAGCAGGTCAAGCCGCTCGCCACCCTCAACGGCACGCTGTGCGCCGTAC
CGCGCACGATCGTGGCGATCCTGGAGAACCACCAGCAGGCCGACGGCTCCGTCCGGGTCCCCGAGGTGCTGCGCCCCTAC
CTGGGCGGCCGTGAGGTCCTGGAGCCGGTCGCCAAGTGA

Protein sequence :
MRASQRARGEDVALVDALLSADERRRSSGVRFDELRAEQKQLGKLIPKAGAEEKAELLGRAEQLKADVKAAEAERDAADA
ETQELLLKLGNLVHPDVPVGGEEDFATLETHGTIRDFGAEGFEPKDHLELGQLLGAIDVERGAKVSGSRFYFLTGVGALL
ELALVNAAIAQATAAGFTPMLTPALVRPQSMAGTGFLGQAAQDVYHLDKDDLYLVGTSEVPLAAYHMDEIIDADRLPLRY
AGFSPCFRREAGSHGKDTRGIFRVHQFDKVEMFSYVAPEDSQAEHQRLLEWEKQWLTSLELPFRVIDVASGDLGSSAARK
FDCEAWIPTQGKYRELTSTSDCTEFQARRLSIRVRDGKQVKPLATLNGTLCAVPRTIVAILENHQQADGSVRVPEVLRPY
LGGREVLEPVAK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
serS YP_003446791.1 seryl-tRNA synthetase Not tested The aminoglycoside resistance gene cluster Protein 3e-64 44