Gene Information

Name : SHJGH_4346 (SHJGH_4346)
Accession : YP_007693345.1
Strain : Streptomyces hygroscopicus TL01
Genome accession: NC_020895
Putative virulence/resistance : Resistance
Product : ABC transport system ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4977533 - 4978243 bp
Length : 711 bp
Strand : -
Note : -

DNA sequence : 
GTGAAGGCGTACGGGGCCGGCGAGACCCGTGTCGTCGCCCTGGACCACGTCGACGTGGACATCGCCCGCGGCCAGTTCAC
CGCGATCATGGGCCCCTCCGGGTCCGGCAAGTCCACCCTGATGCACTGCCTCGCCGGCCTGGACACGGTGACGAGCGGCC
GGATCCACCTGGACGAGACCGAGATCACCGGCCTGAAGGACAAGAAGCTCACCCAGCTGCGCCGGGACCGGATCGGCTTC
ATCTTCCAGGCGTTCAACCTGCTGCCGACGCTGAACGCGATCGAGAACATCACGCTGCCCATGGACATCGCCGGCCGCAA
GCCCGACCGGGCCTGGCTGGACCGCGTGGTGGAGACCGTCGGGCTCGCCGGGCGCCTCAAGCACCGCCCCACCCAGCTCT
CCGGCGGCCAGCAGCAGCGCGTCGCCGTGGCCCGCGCGCTCGCCGCCCGCCCGGAGATCATCTTCGGGGACGAGCCGACC
GGGAACCTCGACTCGCGCGCCGGAGCCGAGGTCCTGGGCTTCCTGCGCCGCTCGGTGGACGAACTCGGCCAGACCATCGT
CATGGTCACCCACGACCCCGTGGCCGCCTCCTACGCCGACCGTGTGCTCTACCTCGCCGACGGCCGGATCGTCGACGAGA
TGTACCAGCCGACGGCCGACCAGGTCCTGGACCGCATGAAGGACTTCGACGCCCGGGGGCGCACGTCATGA

Protein sequence : 
MKAYGAGETRVVALDHVDVDIARGQFTAIMGPSGSGKSTLMHCLAGLDTVTSGRIHLDETEITGLKDKKLTQLRRDRIGF
IFQAFNLLPTLNAIENITLPMDIAGRKPDRAWLDRVVETVGLAGRLKHRPTQLSGGQQQRVAVARALAARPEIIFGDEPT
GNLDSRAGAEVLGFLRRSVDELGQTIVMVTHDPVAASYADRVLYLADGRIVDEMYQPTADQVLDRMKDFDARGRTS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-35 46
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-38 44
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-38 44
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-38 44
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 2e-27 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SHJGH_4346 YP_007693345.1 ABC transport system ATP-binding protein CP001581.1.gene798.p Protein 4e-36 47
SHJGH_4346 YP_007693345.1 ABC transport system ATP-binding protein CP001581.1.gene598.p Protein 7e-41 46
SHJGH_4346 YP_007693345.1 ABC transport system ATP-binding protein NC_012469.1.7686878. Protein 4e-37 44
SHJGH_4346 YP_007693345.1 ABC transport system ATP-binding protein NC_008702.1.4606598. Protein 3e-33 44