Gene Information

Name : SHJGH_3452 (SHJGH_3452)
Accession : YP_007692451.1
Strain : Streptomyces hygroscopicus TL01
Genome accession: NC_020895
Putative virulence/resistance : Virulence
Product : glutamine synthetase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3972007 - 3973416 bp
Length : 1410 bp
Strand : +
Note : -

DNA sequence :
ATGTTCCAGAACGCCGACGAGGCCAAGAAGTTCATCGCGGACGAGGACGTCAAGTTCGTCGACGTCCGCTTCTGCGACCT
GCCGGGCGTCATGCAGCACTTCACGGTGCCCGTTGAGGCGTTCGACCCGGACGAGGAGCTGGCCTTCGACGGATCGTCGA
TCCGTGGTTTCCAGGCCATCCACGAGTCCGACATGGCTCTGCGTGCCGACCTGTCCACGGCCCGTGTGGACCCGTTCCGC
CGTGACAAGACCCTCAACATCAACTTCTTCATCCACGACCCGATCACGGGCGAGCAGTACTCCCGTGACCCGCGCAACGT
GGCGAAGAAGGCGGAGGCGTACCTGGCGTCGACCGGGATCGCGGACACCGCGTACTTCGGCCCCGAGGCCGAGTTCTACG
TCTTCGACAGCGTGCGTTTCGCCACCTCCGCGAACGAGTCCTTCTACCACATCGACTCCGAGGCGGGCGCCTGGAACACC
GGCGCGCTGGAGAACAACCGCGGGTACAAGGTCCGCTACAAGGGCGGCTACTTCCCGGTGGCCCCGGTCGACCACTTCGC
CGACCTGCGCGCCGAGATCTCCCTGGAGCTGGAGCGGTCCGGCCTGAAGGTCGAGCGCCAGCACCACGAGGTGGGCACGG
CCGGCCAGGCGGAGATCAACTACAAGTTCAACACCCTGCTCGCCGCCGCCGACGACCTCCAGCTCTTCAAGTACATCGTG
AAGAACGTCGCCTGGCGCAACGGCAAGACCGCGACCTTCATGCCGAAGCCGATCTTCGGTGACAACGGCTCGGGCATGCA
CGTGCACCAGTCGCTGTGGAGCAACGGCGACCCGCTGTTCTACGACGAGGCCGGTTACGCGGGTCTGTCGGACACCGCCC
GCTACTACATCGGCGGCATCCTCCGGCACGCCCCGTCGCTGCTGGCCTTCACCAACCCGACGGTGAACTCGTACCACCGT
CTGGTGCCGGGCTTCGAGGCGCCGATCAACCTGGTGTACTCGCAGCGCAACCGCTCCGCCGCGATGCGCATCCCGATCAC
GGGTTCCAACCCGAAGGCCAAGCGTGTCGAGTTCCGCGCGCCCGACTCCTCCGGCAACCCGTACCTGGCCTTCTCGGCCC
TGCTCCTCGCGGGCCTGGACGGCATCAAGAACAAGATCGAGCCGGCCGAGCCGATCGACAAGGACCTGTACGAGCTGGCT
CCCGAGGAGCACGCGAACGTCGCCCAGGTCCCGACCTCGCTGAACGCCGTCCTCGACGCGCTGGAGGCCGACCACGAGTT
CCTCCTCCAGGGCGACGTGTTCACGTCCGACCTGATCGAGACGTGGATCGACTTCAAGCGCACCAACGAGATCGCCCCGC
TCCAGCTGCGCCCGCACCCGCACGAGTTCGAACTGTACTTCGACGTGTGA

Protein sequence :
MFQNADEAKKFIADEDVKFVDVRFCDLPGVMQHFTVPVEAFDPDEELAFDGSSIRGFQAIHESDMALRADLSTARVDPFR
RDKTLNINFFIHDPITGEQYSRDPRNVAKKAEAYLASTGIADTAYFGPEAEFYVFDSVRFATSANESFYHIDSEAGAWNT
GALENNRGYKVRYKGGYFPVAPVDHFADLRAEISLELERSGLKVERQHHEVGTAGQAEINYKFNTLLAAADDLQLFKYIV
KNVAWRNGKTATFMPKPIFGDNGSGMHVHQSLWSNGDPLFYDEAGYAGLSDTARYYIGGILRHAPSLLAFTNPTVNSYHR
LVPGFEAPINLVYSQRNRSAAMRIPITGSNPKAKRVEFRAPDSSGNPYLAFSALLLAGLDGIKNKIEPAEPIDKDLYELA
PEEHANVAQVPTSLNAVLDALEADHEFLLQGDVFTSDLIETWIDFKRTNEIAPLQLRPHPHEFELYFDV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glnA YP_003728749.1 glutamine synthetase Not tested cag PAI Protein 4e-88 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SHJGH_3452 YP_007692451.1 glutamine synthetase VFG1399 Protein 2e-167 72