Gene Information

Name : SHJGH_3253 (SHJGH_3253)
Accession : YP_007692252.1
Strain : Streptomyces hygroscopicus TL01
Genome accession: NC_020895
Putative virulence/resistance : Virulence
Product : pyruvate kinase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3749938 - 3751374 bp
Length : 1437 bp
Strand : -
Note : -

DNA sequence :
ATGCGCCGAGCAAAGATCGTTTGTACCCTGGGGCCCGCCACCGACTCGTACGACCAGATCAAGGCACTGGTCGAGGCCGG
AATGGACGTCGCCCGGTTCAACCTCAGCCACGGCACCCACGCCGATCACGAGGAGCGGTACCAGCGCGTGCGAAAGGCGG
CCGACGAGACCGGGCGCAGCGTCGGAATCCTCGCCGACCTTCAGGGCCCGAAGATCCGGCTCGGCCGCTTCGCCGAAGGA
CCCGTACTCCTTGAACGCGACGACACCTTCACCATCACCGTGGAGGAAGGCGTCCACGGCGACCGCCACCGGTGCGGCAC
CACCCACGCCGGCCTCGCCACCGACGTCACCCCCGGCGAGCGCATCCTCGTGGACGACGGCAAGGTCTGCCTGGAGGTCA
CCGACGTCGACGGCCCCCGCGTACACACCCGGGTGGTCGAGGGCGGCGTCATCTCCGACCACAAGGGCCTGAACCTCCCC
GGCGTGGCCGTCTCCGTCCCCGCCCTCTCCAAGAAGGACGAGGACGACCTGCGCTGGGCGCTGCGCACCGGCTTCGACGT
CATCGCCCTCTCCTTCGTCCGCAGCGGCGACGACGTCGTGGACGTGCACCGGATCATGGCCGAGGAAGGCCGCCGCCTCC
CCGTCATCGCCAAGATCGAGAAGCCGCAGGCCGTGGCCGACCTCGACGGCATCGTGGCCGCCTTCGACGGGCTGATGGTC
GCACGTGGCGACCTCGGCGTGGAGATGCCGCTGGAGCAGGTGCCGATCGTCCAGAAGCGCGCCATCAAGCTCGCCAAGCG
CAATGCCAAGCCGGTGATCGTCGCCACCCAGATGCTCGACTCGATGATCGAGAACTCCCGGCCCACCCGCGCCGAGGCCT
CCGACGTCGCCAACGCGGTCCTCGACGGCACGGACGCGGTCATGCTCTCCGGCGAGACCAGCGTCGGCAAGTACCCGGTC
GAGACCGTACGCACCATGGCGAAGATCGTCGCAGCGGCCGAGGAGGACATGCTGGCGGCGGGCCTGCCGCCGCTCACCGA
GCGGAACAAACCGCGCACCCAGGGCGGCGCGGTCGCCCGGGCCGCCGCCGAGATGGGCGACTTCCTCGGCGCGAAGTTCC
TGGTCGCGTTCACCCAGTCCGGGGACACCGCCCGCCGCCTCTCCCGCTACCGCTCCCCGATCCCCCTCCTGGCCTTCACG
CCGGAGCCGGCCACCCGCTCCCAGCTCAGCCTCACGTGGGGCGCGGAGACCTTCCTCGGTCCGCACGTGGACTCCACGGA
CGCCATGGTCGACCAGGTGGACGAACTGCTCCTGAAGTACGGCCGCTGCCAGAAGGGCGACGTCGTGGTGATCACGGCCG
GCTCCCCGCCCGGCGTCTCCGGCTCGACCAACATGGTCCGCGTCCACCACATCAGCGAGGACGACAGCCCGAAGTGA

Protein sequence :
MRRAKIVCTLGPATDSYDQIKALVEAGMDVARFNLSHGTHADHEERYQRVRKAADETGRSVGILADLQGPKIRLGRFAEG
PVLLERDDTFTITVEEGVHGDRHRCGTTHAGLATDVTPGERILVDDGKVCLEVTDVDGPRVHTRVVEGGVISDHKGLNLP
GVAVSVPALSKKDEDDLRWALRTGFDVIALSFVRSGDDVVDVHRIMAEEGRRLPVIAKIEKPQAVADLDGIVAAFDGLMV
ARGDLGVEMPLEQVPIVQKRAIKLAKRNAKPVIVATQMLDSMIENSRPTRAEASDVANAVLDGTDAVMLSGETSVGKYPV
ETVRTMAKIVAAAEEDMLAAGLPPLTERNKPRTQGGAVARAAAEMGDFLGAKFLVAFTQSGDTARRLSRYRSPIPLLAFT
PEPATRSQLSLTWGAETFLGPHVDSTDAMVDQVDELLLKYGRCQKGDVVVITAGSPPGVSGSTNMVRVHHISEDDSPK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY1744 NP_456147.1 pyruvate kinase Not tested SPI-2 Protein 2e-79 42
pykF YP_216386.1 pyruvate kinase Not tested SPI-2 Protein 1e-79 42
pykF NP_805051.1 pyruvate kinase Not tested SPI-2 Protein 1e-79 42
pykF CAA68205.1 pyruvate kinase like protein Not tested SPI-2 Protein 5e-79 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SHJGH_3253 YP_007692252.1 pyruvate kinase VFG0479 Protein 6e-80 42