Gene Information

Name : SHJGH_3159 (SHJGH_3159)
Accession : YP_007692159.1
Strain : Streptomyces hygroscopicus TL01
Genome accession: NC_020895
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3646519 - 3647271 bp
Length : 753 bp
Strand : +
Note : -

DNA sequence : 
GTGAGTGACGGCCACGCTCCGGTACTGCGGGCCGAGGGGCTGGTGAAGACCCACTACGGCGAGGGCGCGCCCGCGCACGC
CGTGCGCGGGGTCGACCTCGGCGTGGCCCGCGGCGAGTTCGTCGCGATCACCGGGCCGTCCGGCGCGGGCAAGTCCACGC
TGCTGCACCTGCTCGGCGGGCTCCAGCGGCCGGACCGGGGCAGTGTCTGGCTCGACGGCCGGTGCACGGACTCCTTCAGC
GAGGCCCGCTGGGCGGTGGAGCGCAGGAAGGCCATCGGGATCGTGTTCCAGTTCTTCAACCTGGTCTCGAACCTGTCGGT
CGCCGACAACGTGGAACTGCCCGCGCTGCTGGCCGGGGTCCCGCCGAAGAAGGCCCGCGCCGAACGGGAGGCGCTGCTCG
CCGAGCTGGGTCTGGAGGGCAAGGAGCGCAGCATGCCGGGTGAGCTGTCCGGAGGTGAGCAGCAGCGGGTCGCGCTCGCC
CGGGCGCTGGTCAACCATCCGCCGCTGCTGCTCGCGGACGAGCCGGCCGGCAGCCTGGACAGCAAGGGCACCCGCGAGGT
GATGCGGCTGCTGTCCCGCTTCCACGGGCGCGGCCAGACCATCGTGCTGGTCACCCACGACGCCCGGCTGGCCAGCGCCG
CCGACCGCGTGATCAGCTTCTTCGACGGCCGCATCGCCGACGACGCGGCCCTGGACGGCGCGCCGCCGCCCCGGCGGAGC
GGCATCTCGGGCGTGCTGGAGCTGAGGGACTGA

Protein sequence : 
MSDGHAPVLRAEGLVKTHYGEGAPAHAVRGVDLGVARGEFVAITGPSGAGKSTLLHLLGGLQRPDRGSVWLDGRCTDSFS
EARWAVERRKAIGIVFQFFNLVSNLSVADNVELPALLAGVPPKKARAEREALLAELGLEGKERSMPGELSGGEQQRVALA
RALVNHPPLLLADEPAGSLDSKGTREVMRLLSRFHGRGQTIVLVTHDARLASAADRVISFFDGRIADDAALDGAPPPRRS
GISGVLELRD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-33 47
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-33 46
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-33 46
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-33 46
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 1e-11 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SHJGH_3159 YP_007692159.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 5e-30 47
SHJGH_3159 YP_007692159.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 1e-33 45
SHJGH_3159 YP_007692159.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 4e-34 43
SHJGH_3159 YP_007692159.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 4e-33 42
SHJGH_3159 YP_007692159.1 ABC transporter ATP-binding protein NC_012469.1.7685735. Protein 2e-33 42