Gene Information

Name : SHJGH_3086 (SHJGH_3086)
Accession : YP_007692086.1
Strain : Streptomyces hygroscopicus TL01
Genome accession: NC_020895
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3574510 - 3575304 bp
Length : 795 bp
Strand : -
Note : -

DNA sequence : 
GTGAGCCGCCCGGAGATCGAGGTCCGCGGACTGCACAAGTCCTTCGGCGACAACGAGGTGCTGCGCGGCATCGACCTGGA
GATCGGCCAGGGCGAGGTCGTCTGCGTCATCGGCCCCTCCGGCTCCGGCAAGTCCACGCTGCTGCGCTGCGTGAACCTGC
TGGAGGAGCCCACCAAGGGCCAGGTCTTCGTCGGCGGCACCGAGGTGACCGACCCCGACGTCGACATCGACGCCGTACGC
CGCCGCATCGGCATGGTCTTCCAGCAGTTCAACCTCTTCCCGCACCTGAACGTCACCGGGAACCTCACACTGCCCCAGCG
CCGCGTCCTCGGGCGGGACAAGGAGACAGCGGCGCGCGTCGCCGCCGAGAACCTCGCCCGCGTCGGCCTCTCGGAGAAGG
CGGACGCCTACCCGTCCTCCCTCTCCGGCGGCCAGCAGCAGCGCGTCGCCATCGCCCGGGCGCTCGCCATGGGCCCCGAG
GTGATGCTCTTCGACGAGCCGACCTCCGCGCTCGACCCCGAGCTGGTCGGCGACGTCCTCGCCGTCATGCGCCGGCTCGC
GCGGGAGGGCATGACCATGATGGTCGTCACCCACGAGATGACCTTCGCCCGCGAGGTCGCCGACCGGGTCGTCTTCATGG
ACGGCGGCGTGATCGTCGAGGACGGCAGCCCGGAACGGGTGATCGGCGACCCGCAGCACGAGCGCACCCGGCACTTCCTC
TCCCGGCTGCTCGACCCGGCGATGGCCGAGGTCGAGGAGGAGACCTCCGACCAGGTGGGGAAGTCCGAGCCGTAG

Protein sequence : 
MSRPEIEVRGLHKSFGDNEVLRGIDLEIGQGEVVCVIGPSGSGKSTLLRCVNLLEEPTKGQVFVGGTEVTDPDVDIDAVR
RRIGMVFQQFNLFPHLNVTGNLTLPQRRVLGRDKETAARVAAENLARVGLSEKADAYPSSLSGGQQQRVAIARALAMGPE
VMLFDEPTSALDPELVGDVLAVMRRLAREGMTMMVVTHEMTFAREVADRVVFMDGGVIVEDGSPERVIGDPQHERTRHFL
SRLLDPAMAEVEEETSDQVGKSEP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-30 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-31 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-31 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-31 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SHJGH_3086 YP_007692086.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 5e-25 44
SHJGH_3086 YP_007692086.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 2e-32 41