Gene Information

Name : SHJGH_3002 (SHJGH_3002)
Accession : YP_007692002.1
Strain : Streptomyces hygroscopicus TL01
Genome accession: NC_020895
Putative virulence/resistance : Virulence
Product : ferrichrome ABC transport system permease protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3481464 - 3482411 bp
Length : 948 bp
Strand : -
Note : -

DNA sequence : 
GTGCTCCTGGTGCTCGTCGCCCTGGCGAGCATCGCGATCGGGGCGAAAGCGCTGTCGCTGGACCAGGTCTGGCACGGCCT
GTTCCACGACACGGGGACGTACGGCGACGTGGTCGTCGACGAGCGGCTCGCGCGTACGGCCCTCGGTCTGCTGGCCGGTG
CCGCGCTCGGCCTGTCCGGCGCGGTGCTCCAGGCGCTGACCCGCAACCCGCTGGCCGAGCCCGGGCTGCTCGGCATGAAC
GCGGGCGCCTCCGCCGCCGTCGTGACGGCCATGACCTACTTCGGCGTCACCAGCCTCAGCGGCTATGTGTGGTTCGCGTT
CCTCGGCGCGGCGGCGGTCGGCGCGCTGGTGTGGTTCCTCGGCGGCAGCCGGGGCGCCACCCCGGTCCGGCTCGCGCTCG
CCGGTACGGCGATCAGCGCGGCCCTGTACGGCTACCTCCAGGCCGTGCTCATCACGGACGGCGCGGCCCTCGGCAAGATG
CGCTTCTGGACGGTGGGTTCGCTGGTCTCGGCCACGAACTCGACCATCGTGCAGGTGCTGCCGTTCCTCGCGGTCGGCAC
GGTCCTCGCGCTCGCCCTGGCCCGGCCGCTGAACGCCGTGGAGATGGGCGACGACACCGCGCGCGCCCTCGGCGCGAACC
TCGGCCGCACCCGGGCGCTGGCCATGCTGGCCGCCGTGGTGCTGTGCGGTGCCGCGACCGCCGCCTGCGGCCCGATCGTC
TTCGTCGGCCTGATGGTCCCGCACGTCGTGCGCTCCTTCACCGGTCCCGACCTGCGCTGGATCATGCCGTACGCCACGGT
CCTGGCGCCCGTGCTGCTGCTCGGCGCCGATGTCGTCGGCCGGGTCGTGGCCCGCCCCGCAGAGCTTCAGGTCGGCATCG
TCACCGCGATCATCGGCGGCCCGGTCTTCATATTTCTCGTACGACGGCGGAGGACGGCCCAGCTGTGA

Protein sequence : 
MLLVLVALASIAIGAKALSLDQVWHGLFHDTGTYGDVVVDERLARTALGLLAGAALGLSGAVLQALTRNPLAEPGLLGMN
AGASAAVVTAMTYFGVTSLSGYVWFAFLGAAAVGALVWFLGGSRGATPVRLALAGTAISAALYGYLQAVLITDGAALGKM
RFWTVGSLVSATNSTIVQVLPFLAVGTVLALALARPLNAVEMGDDTARALGANLGRTRALAMLAAVVLCGAATAACGPIV
FVGLMVPHVVRSFTGPDLRWIMPYATVLAPVLLLGADVVGRVVARPAELQVGIVTAIIGGPVFIFLVRRRRTAQL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SPN23F_09540 YP_002510937.1 ferric siderophore ABC transporter permease Virulence PPI-1 Protein 7e-33 42
SP_1033 NP_345508.1 iron ABC transporter permease Virulence PPI-1 Protein 6e-33 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SHJGH_3002 YP_007692002.1 ferrichrome ABC transport system permease protein VFG0926 Protein 3e-26 46