Gene Information

Name : SHJGH_2390 (SHJGH_2390)
Accession : YP_007691390.1
Strain : Streptomyces hygroscopicus TL01
Genome accession: NC_020895
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2834728 - 2836251 bp
Length : 1524 bp
Strand : +
Note : -

DNA sequence :
ATGACTCGTTACGCGGCGCCGGGCACCGAAGGCTCGATCGTCTCCTACCAGGCGCGCTACGACCACTACATCGGCGGCGC
CTATGTGCCGCCGGCGCGCGGGCAGTACTTCGAGAACCCGTCACCGGTCAACGGTCAGCCGTTCACGGAGATCGCGCGCG
GTACCGCGGAGGACGTCGAGCGGGCGCTGGACGCGGCGCACGAGGCGGCGCCCGGGTGGGGTCGTACGCCGGTCGCGGAG
CGGTCCGACATCCTGCTGAAGATCGCCGACCGGATGGAGGCCCACCTGGAGCCGCTGGCGGTGGCCGAGAGCTGGGAGAA
CGGCAAGCCGGTCCGGGAGACACTGGCCGCCGACATCCCCCTCGCGATCGACCACTTCCGCTACTTCGCCGGGGCGATCC
GGGCGCAGGAGGGTTCGCTGGGCGAGCTGGACGACGACACGGTGGCGTACCACTTCCACGAGCCGCTCGGTGTCGTCGCG
CAGATCATCCCGTGGAACTTCCCGATCCTGATGGCGACGTGGAAGCTCGCGCCGGCGCTCGCCGCGGGCAACGCGGTCGT
CCTCAAGCCGGCCGAGCAGACCCCGGCCTCCATCCACTACTGGCTGAGCCTGGTCGCGGACCTGCTGCCGCCGGGTGTGC
TGAACATCGTCAACGGGTTCGGTGTGGAGGCGGGCAAGCCGCTGGCGTCGAGCCCGCGGGTGGCGAAGATCGCGTTCACC
GGGGAGACCACGACCGGGCGGCTGATCATGCAGTACGCCTCGGAGAACATCAAGCCGGTCACCCTGGAACTCGGCGGGAA
GTCGCCGAACATCTTCTTCGACGACGTGTGGGCGCACGACGACGACTTCCGCGACAAGGCGCTCGAAGGCTTCACGATGT
TCGCGCTCAACCAGGGCGAGGTCTGCACGTGCCCGTCCCGGGCGCTGATCCAGCGCGGTCACTACGCGGAGTTCCTGGAG
GCGGCCGTCGAACGCACCCGGCGCATCAAGCCGGGCCACCCGCTGGACACCGACACCATGATCGGCGCGCAGGCCTCCAA
CGACCAGCTGGAGAAGATCCTCTCCTACCTGGACATCGGCCGCCAAGAGGGCGCGAAGGTCCTCACGGGCGGTGAACGCT
TCGAGCACGAGGGCGAACTGAAGGGCGGTTACTACGTCCAGCCCACCATCTTCGAGGGCGACAACCGCATGCGGATCTTC
CAGGAGGAGATCTTCGGCCCGGTCGTCTCGGTGGCCTCCTTCGACGACTTCGACGACGCGATCAAAATCGCCAACGACAC
GCTGTACGGCCTGGGCGCGGGCGTGTGGACCCGGGACATGAACACCGCCTACCGCGCGGGCCGCGCGATCCAGGCCGGCC
GTGTGTGGACCAACTGCTACCACGCCTATCCCGCGCACGCGGCGTTCGGCGGCTACAAGCAGTCGGGGATCGGCCGTGAG
ACGCACAAGATGATGCTGGAGCACTACCAGCAGACGAAGAACCTCCTGGTGTCGTACTCACCGAAGAAGCTGGGCTTCTT
CTAG

Protein sequence :
MTRYAAPGTEGSIVSYQARYDHYIGGAYVPPARGQYFENPSPVNGQPFTEIARGTAEDVERALDAAHEAAPGWGRTPVAE
RSDILLKIADRMEAHLEPLAVAESWENGKPVRETLAADIPLAIDHFRYFAGAIRAQEGSLGELDDDTVAYHFHEPLGVVA
QIIPWNFPILMATWKLAPALAAGNAVVLKPAEQTPASIHYWLSLVADLLPPGVLNIVNGFGVEAGKPLASSPRVAKIAFT
GETTTGRLIMQYASENIKPVTLELGGKSPNIFFDDVWAHDDDFRDKALEGFTMFALNQGEVCTCPSRALIQRGHYAEFLE
AAVERTRRIKPGHPLDTDTMIGAQASNDQLEKILSYLDIGRQEGAKVLTGGERFEHEGELKGGYYVQPTIFEGDNRMRIF
QEEIFGPVVSVASFDDFDDAIKIANDTLYGLGAGVWTRDMNTAYRAGRAIQAGRVWTNCYHAYPAHAAFGGYKQSGIGRE
THKMMLEHYQQTKNLLVSYSPKKLGFF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 2e-145 60
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 4e-151 59
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 4e-151 59
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 4e-151 59
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 1e-150 59

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SHJGH_2390 YP_007691390.1 aldehyde dehydrogenase VFG0082 Protein 9e-146 60