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Name : gabD (CMN_00896) Accession : YP_007685196.1 Strain : Clavibacter michiganensis NCPPB 2581 Genome accession: NC_020891 Putative virulence/resistance : Unknown Product : putative succinate-semialdehyde dehydrogenase Function : - COG functional category : - COG ID : - EC number : 1.2.1.16 Position : 916259 - 917734 bp Length : 1476 bp Strand : + Note : Cmm ortholog CMM_0933; Cms ortholog CMS_0193 DNA sequence : ATGAGCGCATCCACCGAGACCGACCTCCTGTCGGGCACGCCCACCACCCTGCTCATCGCGGGCGAGCGGGTGGACGCGGA GGGCGGGTCGACGTTCGAGGTCCGGGATCCCGCGACCGACGCCGTCATCGCGCACGTCGCCGACGCGAGCCCCGCGGACG GCGCGCGCGCCCTCGACGCGGCGGTCGACGCGCAGGCGGCGTGGGCGGCGACGGCGCCGCGCGCCCGGGGCGAGATCCTC CGCCGCGCGTTCGACCTGCTCCAGGAGCGCAAGGACGAGTTCGCGCTCCTCATGACGCTCGAGATGGGCAAGCCGCTGGC CGAGTCGCTCGGCGAGGTGACCTACGGAGGCGAGTTCCTCCGCTGGTTCTCCGAGGAGGCCGTGCGCATCACGGGCCGCT ACGGCACGAACCCCGAGGGGACCGGCCGCATGATCGTGTCGCAGCATCCGGTCGGGCCGGTGCTGCTCATCACCCCCTGG AACTTCCCGCTCGCGATGGCGACCCGCAAGATCGCGCCGGCGCTCGCCGCGGGCTGCACCGTGGTCATCAAGCCTGCCGA CCTCACGCCGCTCACCACGCTCCGGTTCGCCGAGCTGCTGGCCGAGGCGGGGCTGCCCGCGGGCGTCCTCAACGTGATCC CCACCACGGAGGCCGCCGACGTCACCGGCCCGCTCATCGCCGACCCGCGGCTCCGCAAGCTGAGCTTCACCGGATCCACG CCCGTCGGCCGCCAGCTCGGCGCGCAGGCCGCGCAGAACGTGCTGCGCGTCTCGCTCGAGCTCGGCGGCAACGCGCCGTT CATGGTCTTCGCCGACGCCGACCTCGACGAGGCCGTGGAGGGCGCCATGGCGGCGAAGTTCCGCAACGTCGGGCAGGCGT GCACGGCGGCGAACCGCTTCATCGTCGAGGCGTCGATCGCGGACGCGTTCGCCGACCGGCTGCAGGAGCGCATCGACCGG ATGCGGATCGGCCGCGGCACCGAGGAGGGCGTCACGGTCGGACCGCTCATCGACGGCCGCGCCGTCGACAAGGCCGACCG GCTGGTGCGCGACGCCGTCGAGCGCGGCGCCACCGTGCGCGCGGGCGGCGCGCCCGGCGAGGGCGTGGGCCACTTCTACC CGCCGACGCTCGTCACGGGCGTCGCCGAGGGCAGCGACATCCTGCGGGAGGAGATCTTCGGGCCGGTCGTCGCGATCGTG CCGTTCAACGACGAGGACGACGCAGTGCGGCTCGCCAACGACACCGAGTTCGGGCTCGTCTCCTACGTCTTCACCCGGGA CCTCGCCCGCGGACAGCGGATGATCGAGCGGCTCGAGACGGGCATGACCGGCCTCAACATGGGCGTCATCTCCAACGCCG CCGCGCCGTTCGGCGGCGTGAAGCAGTCGGGGCTCGGCCGGGAGGGCGGGCTCGAGGGGATCCACGAGTACCTGAACACG AAGTACACGCTCACGCCCGACCCCTTCGCGTCGTAG Protein sequence : MSASTETDLLSGTPTTLLIAGERVDAEGGSTFEVRDPATDAVIAHVADASPADGARALDAAVDAQAAWAATAPRARGEIL RRAFDLLQERKDEFALLMTLEMGKPLAESLGEVTYGGEFLRWFSEEAVRITGRYGTNPEGTGRMIVSQHPVGPVLLITPW NFPLAMATRKIAPALAAGCTVVIKPADLTPLTTLRFAELLAEAGLPAGVLNVIPTTEAADVTGPLIADPRLRKLSFTGST PVGRQLGAQAAQNVLRVSLELGGNAPFMVFADADLDEAVEGAMAAKFRNVGQACTAANRFIVEASIADAFADRLQERIDR MRIGRGTEEGVTVGPLIDGRAVDKADRLVRDAVERGATVRAGGAPGEGVGHFYPPTLVTGVAEGSDILREEIFGPVVAIV PFNDEDDAVRLANDTEFGLVSYVFTRDLARGQRMIERLETGMTGLNMGVISNAAAPFGGVKQSGLGREGGLEGIHEYLNT KYTLTPDPFAS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 4e-99 | 49 |
| cur_1509 | YP_001800903.1 | NAD-dependent aldehyde dehydrogenase | Not tested | Not named | Protein | 5e-94 | 47 |
