Gene Information

Name : CMN_00835 (CMN_00835)
Accession : YP_007685136.1
Strain : Clavibacter michiganensis NCPPB 2581
Genome accession: NC_020891
Putative virulence/resistance : Unknown
Product : transcriptional regulator, LacI family
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 839124 - 840143 bp
Length : 1020 bp
Strand : +
Note : Cmm ortholog CMM_0875; Cms ortholog CMS_0130

DNA sequence :
ATGACGACGGAGACGCCGCGCGGCAGGGCGCCCAGCATCCGCGACGTCGCGCGCCTCGCCGGGGTCTCGCACCAGACGGT
CTCGCGCGTGCTCAACGACTCGCCCTCGCTCCGCGCCGAGACGCGGCAGCGCGTGCTCGACGTGATGGAGCAGATCCAGT
ACCGCCCGAACCGCGCGGCCCGCGCCCTCGTCACCAGCCGCTCCCGCACCATCGGCGTGCTCACCGCCCAGAGCTCCCAG
TACGGTCCCGCGTCCTCCATCGCGGCGATCGAGTCGGCCGCCCGCGAGGCCGGCTACCTGGTCACGACCACGAACCTGCC
CTCGTCCGACGAGGCCGCGATCCAGGTCGCGCTCGGCCACCTCGTCGACCAGGCCGTGGAGGGCCTCGTGGTCGTGGCGC
CGCAGGTGCGCGTGCGCGAGGTCATCGCGAGCATGTCGCTCGACGTCCCCTACGTGACCATGCAGAGCGACGGGCGCGGG
GACGCGCACGACCTCTCGGTCGACCAGATCGCGGGCGCGCGGCTCGCCACGCGGCACCTGCTCGACCTCGGCCACCGCGA
CATCTACCACCTCGCCGGTCCCCAGGACTGGATCGAGGCCGAGGCCCGGATGCGCGGCTTCCTCGACGCCATGTCGGCCG
CCGACGCCCCCACCACCGCGCCCATCCTCGGCGACTGGACGGCGGAGTTCGGCTTCTACGCGGGCCGCGAGATGCTGCGC
CTCCGCGACTTCACGGCGATCTTCTCCAGCAACGACCAGATGGCCCTCGGCCTCATCCACGCCGTGCGCGACGCCGGCCT
CGACGTCCCCCGTGACGTCAGCATCGTCGGCTTCGACGACATCCCCGAGGCCGCGCACTTCTGGCCCCCGCTCACCACCG
TGCGGCAGGACTTCGCCGAGGTCGGCCGCCGCTGCGTCGCCCTGCTGCTCGATGGCATGGACGGCACGGGGGACCGGTAC
CGCGGCACGATCACGCCCGAGCTGGTCGTGCGCGCGTCCACCGGACTGCCCTCGTCCTGA

Protein sequence :
MTTETPRGRAPSIRDVARLAGVSHQTVSRVLNDSPSLRAETRQRVLDVMEQIQYRPNRAARALVTSRSRTIGVLTAQSSQ
YGPASSIAAIESAAREAGYLVTTTNLPSSDEAAIQVALGHLVDQAVEGLVVVAPQVRVREVIASMSLDVPYVTMQSDGRG
DAHDLSVDQIAGARLATRHLLDLGHRDIYHLAGPQDWIEAEARMRGFLDAMSAADAPTTAPILGDWTAEFGFYAGREMLR
LRDFTAIFSSNDQMALGLIHAVRDAGLDVPRDVSIVGFDDIPEAAHFWPPLTTVRQDFAEVGRRCVALLLDGMDGTGDRY
RGTITPELVVRASTGLPSS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CMM_0036 YP_001220775.1 LacI family transcriptional regulator Not tested chp/tomA region Protein 2e-42 44