Gene Information

Name : metB (CMN_00833)
Accession : YP_007685134.1
Strain : Clavibacter michiganensis NCPPB 2581
Genome accession: NC_020891
Putative virulence/resistance : Resistance
Product : cystathionine gamma-synthase
Function : -
COG functional category : -
COG ID : -
EC number : 2.5.1.48
Position : 836972 - 838144 bp
Length : 1173 bp
Strand : +
Note : Cmm ortholog CMM_0873; Cms ortholog CMS_0128

DNA sequence :
GTGAGCGACAAGCACGACTTCGACACCCGCGCCATCCACGCCGGCCAGGACCCCGACCCCACCACGGGCGCGGTCATCCC
GCCCCTGTACCTCACGAGCACCTTCGTGCAGGACGGCATCGGCGGGCTCCGCGGCGGCTACGAGTACGCGCGGAGCGCCA
ACCCCACGCGCACCGGCCTGCAGGAGCTGCTCGCGTCGCTCGAGAAGGGGACGCACGCGTTCTCGTTCGCCTCGGGGCTC
GCCGCCGAGGACACGCTGCTGCGCGCGATCACCCGCCCCGGCGACCGCATCGTGCTGAGCGACGACGTGTACGGCGGCAC
CTACCGCCTCCTCACGCGCGTGCTCGGTGACTGGGGGATCGTCGTCGAGACCGTCGACATGAGCGACCTCGCCGCGGTCG
AGCGGGTCCTCGGATCCGGCCCCGCGAAGGTCCTCTGGGTCGAGACGCCGAGCAACCCGCTGATGAAGATCAGCGACATC
CGCGCGCTCGCCGACCTCGGCCACGCGGCCGGCGCCACGGTCGTCGTCGACAACACGTTCGCCTCGCCGTACCTCCAGCA
GCCGCTGACGCTCGGCGCCGACGTGGTCGTGCACTCGACCACCAAGTACCTGGGCGGCCACTCCGACGTGCTCGGGGGCG
CCGTGATCCTCGACGACGACGCGCTGGCCGAGAAGGTCGGCTTCCTCCAGTTCGCGATCGGCGCGGTCTCCGGCCCCATG
GACGCCTGGCTCACCACGCGCGGGATCAAGACCCTCGCCGTCCGCATGGAGCGCCACTCCGCGAACGCCGAGGAGATCGC
CGCGTTCCTGCAGCAGCACCCCGACGTCACGGCCGTGCACTACCCGGGCCTCCCGGAGCACCCGGGCCACGACATCGCCA
CGGCCCAGATGACGGGCTTCGGCGGCATGATCTCGTTCCAGGTCCGCGGGGGAGCGAAGGCCGCGCGCCGCGTGGTCGAG
GGCACGCGCGTCTTCCAGCTGGCGGAGTCGCTCGGCGGCGTGGAGTCGCTCATCAGCTACCCGTCCGAGATGACGCACGC
GTCCGTCAAGGGCACGCCGCTCGAGGTGCCGGATGACCTGGTGCGCCTCTCGGTGGGCATCGAGGCCGTCGAGGACCTGG
TGGTCGACCTCGAGCGCGCGCTCGGCAAGGCGCTCAAGCAGGGCAAGCACTAG

Protein sequence :
MSDKHDFDTRAIHAGQDPDPTTGAVIPPLYLTSTFVQDGIGGLRGGYEYARSANPTRTGLQELLASLEKGTHAFSFASGL
AAEDTLLRAITRPGDRIVLSDDVYGGTYRLLTRVLGDWGIVVETVDMSDLAAVERVLGSGPAKVLWVETPSNPLMKISDI
RALADLGHAAGATVVVDNTFASPYLQQPLTLGADVVVHSTTKYLGGHSDVLGGAVILDDDALAEKVGFLQFAIGAVSGPM
DAWLTTRGIKTLAVRMERHSANAEEIAAFLQQHPDVTAVHYPGLPEHPGHDIATAQMTGFGGMISFQVRGGAKAARRVVE
GTRVFQLAESLGGVESLISYPSEMTHASVKGTPLEVPDDLVRLSVGIEAVEDLVVDLERALGKALKQGKH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 9e-82 48
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 8e-83 48
metB YP_281510.1 cystathionine beta-lyase Not tested Not named Protein 1e-60 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
metB YP_007685134.1 cystathionine gamma-synthase BAC0207 Protein 1e-71 43