Gene Information

Name : phrB (CMN_00502)
Accession : YP_007684818.1
Strain : Clavibacter michiganensis NCPPB 2581
Genome accession: NC_020891
Putative virulence/resistance : Unknown
Product : Deoxyribodipyrimidine photo-lyase
Function : -
COG functional category : -
COG ID : -
EC number : 4.1.99.3
Position : 494920 - 496446 bp
Length : 1527 bp
Strand : -
Note : Cmm ortholog CMM_0534; Cms ortholog CMS_0451

DNA sequence :
ATGAGCGACGACGACGCCCCGGACCGCGGATCCGACGATCGGGAGGGCGGCGACGGGGCGCAGGGCCCGAGCATCGTGTG
GCTCCGCGACGACCTCCGCGTGGCCGACAACCCGGCGCTGCACGCGGCCGTCGAGCGGGGCGAGCCCATCGTGGTGCTGT
ACGTGCTCGACGAGGAGAGCGACGGGATCCGGCCGCTCGGCGGCGCCGCGCGCTGGTGGCTGCACATGAGCCTCGCGCGC
CTCGGGGAGTCGCTCCGGGAGCTCGGCTCCCCGCTGGTGCTACGCCGCGGGAAGGCCGCCGACGTCGTCGACGGCCTCGT
GCGAGAGGTCGGCGCGGGCGCGGTGCTGTGGAACCGTCGCTACGGCGGCGCGGAGATCGCGGTCGACACCGCCATCAAGA
AGGGCCTCGGCGACCGGGGCCTCGACGTGCGCAGCTTCCAGGGGTCGCTGCTCGTCGAGCCGTGGACGGTGACGAACAAG
CAGGGCGAGCCGTTCCGGGTCTACACGCCGTTCTGGAAGACCGCCCAGGAGCGCGAGGAGCCGCGGAAGCCGCTCCCCGC
GCCGCACGAGCTCGACGCGCCGCGGACGGCTCCCCGCTCGGACGACCTCGACGGCTGGGGGCTGCTGCCGACCAAGCCCG
ACTGGGCGGCCGGCCTCCGCGAGGCCTGCGACCCCGGCGAGGCCGCCGGACTGCAGCGCCTCGAGGACTTCGTGCACCAC
GAGCTCGAGGACTACTCCACCCAGCGCGACGAGCCCGCGGCGATGACGACCTCGCGGCTGTCGGCGTACCTGCGCTGGGG
CGAGGTGAGCCCGTTCCAGGTGTGGCACCGGATCCAGCGCACGCGCGGCAAGAAGGTCGGGGGCGACGGGGTCAACGCCA
CCAAGTTCCTCTCGGAGCTCGGCTGGCGGGAGTTCAGCTACCACCTGCTGTACCACCAGCCGGATCTCGCGACCCGGAAC
TTCGTGCCGCGCTTCGACGCGTTCCCCTGGGACGAGCCGACCGACGAGACGCTCGGCGCGTGGCAGCGCGGAGAGACGGG
TGTGCCGCTCGTCGACGCCGGCATGCGCGCGCTCTGGAAGGACGGGCACCTGCACAACCGGGTGCGGATGGTCGTGGCGT
CGTTCCTCATCAAGAACCTGCTGATCGACTGGCGCCACGGCGAGCAGTGGTTCTGGGACACGCTCGTCGACGCGGACGCG
GCCAACAACGCGGCCAGCTGGCAGTGGGTCGCGGGATCCGGCGCGGACGCCGCCCCGTACTTCCGGGTGTTCAACCCCGT
GCTGCAGGGGCGGAAGTTCGACCCGGCGGGCGAGTACATCCGCTCGTACGTGCCCGAGCTGGCGCACGCGCCGCGGGACG
TGGTGCACGAGCCGTGGAAGGTGATGGGCGACCTGGTCGCGAGCGCCGAGGACGGCGCGGACGACCAGGCCGCGGGCGGG
CTCGCGGCCTACCCGGCGCCGATCGTCGACCTCAAGGAGTCCCGGCAGCGGGCACTCGCGGCGTACGACGAGATCAAGGA
CCGCTGA

Protein sequence :
MSDDDAPDRGSDDREGGDGAQGPSIVWLRDDLRVADNPALHAAVERGEPIVVLYVLDEESDGIRPLGGAARWWLHMSLAR
LGESLRELGSPLVLRRGKAADVVDGLVREVGAGAVLWNRRYGGAEIAVDTAIKKGLGDRGLDVRSFQGSLLVEPWTVTNK
QGEPFRVYTPFWKTAQEREEPRKPLPAPHELDAPRTAPRSDDLDGWGLLPTKPDWAAGLREACDPGEAAGLQRLEDFVHH
ELEDYSTQRDEPAAMTTSRLSAYLRWGEVSPFQVWHRIQRTRGKKVGGDGVNATKFLSELGWREFSYHLLYHQPDLATRN
FVPRFDAFPWDEPTDETLGAWQRGETGVPLVDAGMRALWKDGHLHNRVRMVVASFLIKNLLIDWRHGEQWFWDTLVDADA
ANNAASWQWVAGSGADAAPYFRVFNPVLQGRKFDPAGEYIRSYVPELAHAPRDVVHEPWKVMGDLVASAEDGADDQAAGG
LAAYPAPIVDLKESRQRALAAYDEIKDR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CD241_0111 YP_005124380.1 putative riboflavin biosynthesis protein Not tested Not named Protein 6e-72 42
DIP0113 NP_938509.1 riboflavin biosynthesis protein Not tested Not named Protein 3e-71 42