Gene Information

Name : CMN_00477 (CMN_00477)
Accession : YP_007684796.1
Strain : Clavibacter michiganensis NCPPB 2581
Genome accession: NC_020891
Putative virulence/resistance : Resistance
Product : ABC transporter, ATPase component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 473724 - 474431 bp
Length : 708 bp
Strand : +
Note : no orthologs in Cmm and Cms

DNA sequence : 
GTGACGGAGGTCCTGGTCGCGCGGGGCCTCACGGTCGACGTCCATCTCACGCGGAAGCAGTCCCTGAGGACCGTCGACGG
GGTGGACCTCGTGGTCCTGGCCGGGGCAGCCCATGCCATCGTGGGGCGATCCGGGTCGGGGAAGACGAGCCTGCTCTCCG
TCCTCGGCCTGCTCGACGCGCGGTTCACGGGCGAGCTCCGCCTCGGCGGCACGGACGTCCGGAGCCTGTCGGACGCGGCA
CGAGCACGACTCCGCAACGAGGGGATCGGCTTCGTCTTCCAGTCGTACTCCCTCATGCCCCAGCACACCGCCCTCCAGAA
CGTGCTCCTGGCCACGGAGTACGGGCCCAGGTCGCGCCGCGGAGGAGCGAGGGCTCGCACCGACGCGTCCCGGCGGGCCC
TCGACCAGGTGGGGTTGTCGGACAAGGCCGCCGCCTTCCCGCGGCAGCTCTCGGGCGGCGAGCAGCAGCGCGTCGCGATC
GCGCGTGCCCTCGTCAACGAACCCCAGCTGATCCTCGCCGACGAGCCCACCGGGGCGTTGGACGAGTCGACCGGCGAGCA
GATCATGTCGCTCCTGATCGATCGAGCTCGACGCGCGGGCTCCGCTCTGGTGATCGTGACGCATGATCCGCTCATCGCGG
CGCGCTGCGAGCGACGCTTCTCGATGAGCGGCGGTCGCCTCGAGCAGGTGGCGGGGGAGATCCGATGA

Protein sequence : 
MTEVLVARGLTVDVHLTRKQSLRTVDGVDLVVLAGAAHAIVGRSGSGKTSLLSVLGLLDARFTGELRLGGTDVRSLSDAA
RARLRNEGIGFVFQSYSLMPQHTALQNVLLATEYGPRSRRGGARARTDASRRALDQVGLSDKAAAFPRQLSGGEQQRVAI
ARALVNEPQLILADEPTGALDESTGEQIMSLLIDRARRAGSALVIVTHDPLIAARCERRFSMSGGRLEQVAGEIR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-21 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-21 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-21 41
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 8e-22 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CMN_00477 YP_007684796.1 ABC transporter, ATPase component NC_012469.1.7686878. Protein 5e-31 45
CMN_00477 YP_007684796.1 ABC transporter, ATPase component NC_008702.1.4606598. Protein 6e-22 44