Gene Information

Name : serS (CMN_00470)
Accession : YP_007684791.1
Strain : Clavibacter michiganensis NCPPB 2581
Genome accession: NC_020891
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : 6.1.1.11
Position : 468057 - 469337 bp
Length : 1281 bp
Strand : +
Note : Cmm ortholog CMM_515; Cms ortholog CMS_0429

DNA sequence :
GTGATCGATCCGCAGACCCTCCGCGACCATCCCGACCTCGTCATCGCCTCGCAGGAGCTGCGCGGCGCGTCCGTGGAGGT
GGTCGACCAGGCGGTCGCCGCGGACTCCGAGCGCCGCCGGGCGGTCACCGAGTTCGAGGGCCTGCGCGCCGAGCAGAACG
CGCACGGCAAGCTCGTCGCGAAGGCCGACAAGGCCGACAAGCCGCGCCTCATCGCCGAGGTGCAGGAGCTGAAGGCCCGC
GTCACCGCCGCGCAGGAGCGGGCGCAGGAGGCCGAGGCCGCGCTCGACGAGGCCATGCGGCGGATCCCGAACATCGTCAT
CGACGGCGTCCCCGCCGGCGGCGAGGACGACTGGGCGCTCGTGCGCGAGGTCGGCGAGAAGCCCGTGTTCGACTTCGAGC
CCCGCGACCACCTGGAGATCGGCGAGATCCTCGACGCGATCGACATGGGCCGCGGTGCCAAGGTCTCCGGCGCCCGCTTC
CACTTCCTCACGGGGATCGGCGCGCGGCTCGAGATCGCCCTGATGAACTTCGGCCTCGCCCGCGCGCTCGAGGCGGGCCT
CGTGCCGCTCATCACGCCCACGCTCGTGAAGCCCGAGATCATGGCCGGCACCGGCTTCCTCGGCGCCCACGCCGACGAGG
TCTACCACCTGGACGACGACGACCTCTACCTCACGGGCACGAGCGAGGTGGCGCTCGCCGGGTACCACGCCGACGAGATC
CTCGACCTGGCCTCGGGCCCCGTCCGCTACGCCGGCTGGTCGACCTGCTACCGCAAGGAGGCGGGCTCCTACGGCAAGGA
CACCCGCGGCATCATCCGCGTGCACCAGTTCCAGAAGCTCGAGATGTTCTCCTACGTCGACCCGGCCGACGCCGAGGCGG
AGCACGATCGCCTGCTCGCGATGCAGGAGCGCATGATGCAGGACCTCGGCCTCACCTACCGCGTCATCGACACGGCGGCG
GGCGACCTCGGATCCAGCGCCGCCCGCAAGTACGACGTCGAAGCGTGGATCCCCACCCAGGGCGCCTACCGCGAGCTCAC
CTCCACCTCGAACTGCACCACCTTCCAGGCCCGCCGCCTCGGCACGCGCTTCCGCGGCGAGGACGGCCGCACCTCGCCCG
TCGCCACGCTCAACGGCACGCTGGCCACCACCCGCTGGATCGTCGCGATCCTCGAGACGCACCAGCAGGCCGACGGCTCG
GTGCGCGTGCCGGAGGCGCTGCGGCCCTACCTCGGCGGCCTCGAGACCCTCGAGCCCGCGACGGCGAAGGCCGCCCGATG
A

Protein sequence :
MIDPQTLRDHPDLVIASQELRGASVEVVDQAVAADSERRRAVTEFEGLRAEQNAHGKLVAKADKADKPRLIAEVQELKAR
VTAAQERAQEAEAALDEAMRRIPNIVIDGVPAGGEDDWALVREVGEKPVFDFEPRDHLEIGEILDAIDMGRGAKVSGARF
HFLTGIGARLEIALMNFGLARALEAGLVPLITPTLVKPEIMAGTGFLGAHADEVYHLDDDDLYLTGTSEVALAGYHADEI
LDLASGPVRYAGWSTCYRKEAGSYGKDTRGIIRVHQFQKLEMFSYVDPADAEAEHDRLLAMQERMMQDLGLTYRVIDTAA
GDLGSSAARKYDVEAWIPTQGAYRELTSTSNCTTFQARRLGTRFRGEDGRTSPVATLNGTLATTRWIVAILETHQQADGS
VRVPEALRPYLGGLETLEPATAKAAR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
serS YP_003446791.1 seryl-tRNA synthetase Not tested The aminoglycoside resistance gene cluster Protein 9e-67 42