Gene Information

Name : CMN_00337 (CMN_00337)
Accession : YP_007684669.1
Strain : Clavibacter michiganensis NCPPB 2581
Genome accession: NC_020891
Putative virulence/resistance : Virulence
Product : putative Fe3+-siderophore ABC transporter, ATPase component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 337947 - 338717 bp
Length : 771 bp
Strand : +
Note : Cmm ortholog CMM_0365; Cms ortholog CMS_930

DNA sequence : 
ATGACGCTCGAGGCGCGGGGCGTCAGCTGGTCGCGGGGCGGGCGGATCGTGGTGGACGACGTCACGCTCGAGCCGGCGCC
CGCATCCACCGTGGGGCTGCTCGGGCCCAACGGCTCGGGCAAGTCGTCGCTGCTGAAGCTGCTGCAGGGGGACGCCGCGC
CGGACTCCGGCCGCGTGACGCTCGACGGCGCCGACCTCGCGGGGCTCCGGCGGCGCGAGGTCGCCCGGCGCGTGGCGACC
GTGACCCAGCACGGCGAGACCGAGGTCGACATCGTGGTGCGCGACGTCGTGCGCCTCGGCCGCACGCCGTACCGGACGCT
CCTCGGCGGCGACACGGCAGAGGACCGGGCGGCGATCGACCGCGCGTTGGCGCACGTAGGGCTCGCGGCGAAGGCCGACC
ACGCGTGGCGGACGCTCTCCGGCGGCGAGCGGCAGCGGGCCCACATCGCGCGCGCCCTCGCGCAGGAGCCGCGCGAGCTG
CTGCTCGACGAGCCCACCAACCACCTCGACATCCGCCACCAGCTGGAGCTGCTCGCGCTCGTGCGCGACCTGCCCGTGAC
CACCGTGGTCGCGCTGCACGACCTCAACCTCGCGGCGATGTTCTGCGACAGCGTGCTGGTGCTGCGCGAGGGGCGCGTGG
TGGCGGGCGGGGATCCGCGCGAGGTGCTGACGCCGGAGCTCATCGCCGACGTCTACGGGGTGCGGGCGCTCGTCAGGCAC
GACGAGGCGCGCGGCTGCACGCAGGTGCTGTTCGACGCGGCGCCGCTCTAG

Protein sequence : 
MTLEARGVSWSRGGRIVVDDVTLEPAPASTVGLLGPNGSGKSSLLKLLQGDAAPDSGRVTLDGADLAGLRRREVARRVAT
VTQHGETEVDIVVRDVVRLGRTPYRTLLGGDTAEDRAAIDRALAHVGLAAKADHAWRTLSGGERQRAHIARALAQEPREL
LLDEPTNHLDIRHQLELLALVRDLPVTTVVALHDLNLAAMFCDSVLVLREGRVVAGGDPREVLTPELIADVYGVRALVRH
DEARGCTQVLFDAAPL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CDCE8392_1767 YP_005134301.1 iron complex transport system ATP-binding protein Virulence Not named Protein 3e-35 48
phuC YP_005686351.1 Iron(III) dicitrate transport permease-like protein yusV Virulence PiCp 7 Protein 1e-22 43
phuC YP_005682167.1 Iron(III) dicitrate transport permease-like protein yusV Virulence PiCp 7 Protein 7e-23 43
phuC YP_005684259.1 Iron(III) dicitrate transport permease-like protein yusV Virulence PiCp 7 Protein 7e-23 43
cpfrc_01918 YP_003784318.1 hypothetical protein Not tested PiCp 7 Protein 8e-23 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CMN_00337 YP_007684669.1 putative Fe3+-siderophore ABC transporter, ATPase component VFG0925 Protein 2e-24 43