Gene Information

Name : CMN_02899 (CMN_02899)
Accession : YP_007687124.1
Strain : Clavibacter michiganensis NCPPB 2581
Genome accession: NC_020891
Putative virulence/resistance : Virulence
Product : iron-siderophore ABC transporter, permease component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3016922 - 3017980 bp
Length : 1059 bp
Strand : -
Note : Cmm ortholog CMM_2930; Cms ortholog CMS_3065

DNA sequence :
ATGTCGCTCCGGGTCCTCGCGCGCGCCTCCGCCCCCGACGCCCCCGAGGGCCGGGCGCGGAGCGGGCTGTCGCGCTCGGC
GGGCCTCGTGCTCGCGCTCGGCGTGCTCGTGCTGGCGGCGCTCGCGAGCATCGCGATCGGCTCCCGCGACATCCCCGTCG
GCGCCGTCGTCGACGCGCTCGCGGGTCGCCCGCGCGACCCGGCCGAGCTCGTCGTGATCCTCGACCTCCGCGTCCCGCGC
ACCCTCGTCGGCCTCGCCGCAGGCCTCGCGCTCGGGGTCGCGGGCGCGCTCATCCAGGCCGTCACGCGGAACTCGCTGGC
GGATCCCGGCATCCTCGGCGTCACCGCGGGCTCGGCCTTCGCGGTCGCCATCGCCACGGGCGTCCTCGGCGTGACCGCCG
TGAGCGGTTACCTCTGGTTCGCCTTCGCGGGGGCGCTCGTGGCCGCCGTCGTGGTCTACGTCGTGGGGTCCGCGGGGCGC
GGCGGCGGGGATCCGGTGCGCCTCACGCTCGCCGGCGTCGCCCTCGGAGCCGTGCTCGCGGGGATCACGTCGGCGCTGCT
GCTGGCCGACCCGCGGGGCTTCAGCGCGATGCGCGCGTGGGAGTCGGGCTCGCTGCAGGACCGCGGCTGGGACGCCCTCG
TGCCGGTCGCGCCCTTCCTCGCGGCGGGCGTGCTGCTCGCCGCGCTCATCGCCCGGAGCCTCGACGCGGTCGCGCTCGGC
GACGACCTGGCGCGCTCCCTCGGCGCGAACGTGGTCGTGGTGCGGGCCGTGGCCGTGGTCGCCGTGACGCTGCTCGCGGG
CGGGGCGACGGCGATGGCCGGGCCGATCGCGTTCGTCGGGCTGATGATCCCGCACATCGCCCGCTGGATCGTGGGCCCCG
ACCAGCGCTGGATCCTCGCGTACACGATCGTGCTCGCGCCCGTGCTGCTGCTCGCGGCCGACATCGTGGGCCGCATCGTG
CTGCGGCCGGCCGAGCTGCCCGCCGGGATCGTGACCGCGGTGCTCGGCGCACCCGTGCTGATCCTGCTCGTCCGCCGGCA
GAGGGCGTCGGGGCTGTGA

Protein sequence :
MSLRVLARASAPDAPEGRARSGLSRSAGLVLALGVLVLAALASIAIGSRDIPVGAVVDALAGRPRDPAELVVILDLRVPR
TLVGLAAGLALGVAGALIQAVTRNSLADPGILGVTAGSAFAVAIATGVLGVTAVSGYLWFAFAGALVAAVVVYVVGSAGR
GGGDPVRLTLAGVALGAVLAGITSALLLADPRGFSAMRAWESGSLQDRGWDALVPVAPFLAAGVLLAALIARSLDAVALG
DDLARSLGANVVVVRAVAVVAVTLLAGGATAMAGPIAFVGLMIPHIARWIVGPDQRWILAYTIVLAPVLLLAADIVGRIV
LRPAELPAGIVTAVLGAPVLILLVRRQRASGL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fagA YP_005680309.1 hypothetical protein Not tested PiCp 1 Protein 8e-16 41
fagA YP_005682399.1 hypothetical protein Virulence PiCp 1 Protein 8e-16 41
fagA YP_003782432.1 integral membrane protein Virulence PiCp 1 Protein 8e-16 41
fagA YP_005684490.1 hypothetical protein Not tested PiCp 1 Protein 8e-16 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CMN_02899 YP_007687124.1 iron-siderophore ABC transporter, permease component VFG0926 Protein 2e-27 48