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Name : clpB (CMN_00288) Accession : YP_007684624.1 Strain : Clavibacter michiganensis NCPPB 2581 Genome accession: NC_020891 Putative virulence/resistance : Virulence Product : ATPase with chaperone activity, ATP-binding subunit Function : - COG functional category : - COG ID : - EC number : - Position : 272797 - 274989 bp Length : 2193 bp Strand : + Note : Cmm ortholog CMM_0316; Cms ortholog CMS_0885 DNA sequence : GTGGCCAACATGCAGGGCGCACCCGCCACCGACGAGAACGCGAAGACCGCGCTCGAGCAGTACGGGGTGAACCTGACCGA GATCGCGAAGAGCGGCAAGCTCGACCCGGTCATCGGACGCGACGCGGAGATCCGGCGCATCAGCCAGGTGCTCACGCGGC GCACCAAGAACAACCCGGTGCTCATCGGCGAGCCCGGCGTCGGCAAGACCGCCGTGGTCGAGGGCCTCGCGCAGCGCATC GTCGCCGGCGATGTGGCCGACTCGCTCAAGGGCAAGCAGCTCGTGTCGCTGGATCTCGCGGCGCTCGTCGCGGGGGCCAA GTACCGCGGCGAGTTCGAGGAGCGGCTGAAGGCGGTGCTCAAGGAGATCGACGACGCCGACGGCGAGATCATCACGTTCG TCGACGAGCTGCACACGCTCATGGGCGCGGGCGGCGGCGAGGGATCCGTCGCCGCGTCCAACATGCTGAAGCCCATGCTC GCGCGCGGCGAGCTGCGCCTCATCGGCGCCACCACGCTCGACGAGTACCGCCAGTACATCGAGAAGGACGCCGCGCTCGA GCGCCGGTTCCAGCAGGTGTACGTCGGCGAGCCGAGCGTCGAGGACACCGTCGCGATCCTCCGCGGGCTCAAGGGCCGGT ACGAGGCGCACCACCAGGTGCCCATCACGGACGCGGCGCTCGTCGCGGCCGCGTCCCTCTCCAACCGCTACATCCCGGCC CGGCAGCTGCCCGACAAGGCCATCGACCTCATCGACGAGGCCGCCTCGCGCCTGCGGATGGAGATCGACTCGTCGCCCGT GGAGATCGACGAGCTGCGGCGCGCGGTCGACCGCATGCGGCTCGAGGAGCTCGCGCTCAAGCGCGAGAAGGACGAGGCGT CGAAGGCGCGGCTCGCGAAGCTGCGCGAGGACGTCGCGGCGCGCGAGCAGACGCTCGGCGAGCTGCAGCGGCGGTGGGAG GCGGAGCGTGCGAGCGTCAACCGCGTCGGCAAGCTGAAGGACGAGCTCAACGAGCTGCGGATCCGCGCCGAGCGGGCCCA GCGAGAGGGGAACCTGGAGAAGGCGTCGCGCCTGCTCTACGGCGAGATCCCGGTGATCGAGCGGGAGGTCGCGCAGGCGG AGGCCGCCGAGTCGGTGCCGTCGGCCGAGGACCGCATGGTGAACGAGCAGGTGACGGCCGAGGACGTGGCGGCGGTCGTC GCGGCGTGGACGGGGATCCCCGTCGGCCGGCTGCTCCAGGGCGAGACGGAGAAGCTGCTGCACCTCGAGCAGGAGCTCGG CAAGCGGCTCATCGGGCAGAAGCAGGCCGTGCGGGCCGTCGCGGACGCGGTGCGCCGCACGCGCGCCGGCATCTCGGATC CCGACCGGCCCACCGGCTCATTCCTCTTCCTCGGCCCCACGGGCGTCGGCAAGACGGAGCTGGCGAAGGCGCTCGCCGAG TTCCTGTTCGACGACGAGAAGGCCATGGTGCGGATCGACATGAGCGAGTACGGCGAGAAGTTCGCCGTCTCGCGCCTGGT GGGCGCGCCTCCCGGATACGTCGGCTACGAGCAGGGCGGCCAGCTGACCGAGGCCGTGCGGCGCCGCCCGTACTCGGTGG TGCTGCTCGACGAGGTCGAGAAGGCGCACCCCGAGGTGTTCGACGTGCTGCTGCAGGTGCTCGACGACGGGCGGCTCACC GACGGCCAGGGCCGCACGGTCGACTTCCGCAACGTGATCCTCGTGCTCACCAGCAACCTCGGCTCGCAGTTCATCAGCGA CGCCACGCTGCCGCTCGACCAGCGCGAGCAGGCCGTGCAGCAGCTCGTGCGCCAGACGTTCAAGCCGGAGTTCGTGAACC GGCTCGACGACATCGTGGTGTTCCAGACGCTGTCGATGGACGACCTCGCGCAGATCGTGGAGCTCTACATCGACCGGCTC GGCGTGCGGCTCGCGGATCGCCGGCTCACGCTCGGCGTCACGCCGGACGCCCGGAGCTGGCTCGCCGAGCGCGGCCACGA CCCGCTGTACGGCGCCCGGCCGCTGCGGCGCCTCATGCAGCGCGAGATCGACGACCGCCTCGCGCGCGAGCTGCTCGCGG GCGACATCCGCGACGGCGACGCGGTGCGGGTCGACCTCGCGCCCGACGGCGACGGCCTCACGGTCAGCCGCGCGTGGAGC GACGAGCCGGAGGATCAGGCGCCCGGCGTCTGA Protein sequence : MANMQGAPATDENAKTALEQYGVNLTEIAKSGKLDPVIGRDAEIRRISQVLTRRTKNNPVLIGEPGVGKTAVVEGLAQRI VAGDVADSLKGKQLVSLDLAALVAGAKYRGEFEERLKAVLKEIDDADGEIITFVDELHTLMGAGGGEGSVAASNMLKPML ARGELRLIGATTLDEYRQYIEKDAALERRFQQVYVGEPSVEDTVAILRGLKGRYEAHHQVPITDAALVAAASLSNRYIPA RQLPDKAIDLIDEAASRLRMEIDSSPVEIDELRRAVDRMRLEELALKREKDEASKARLAKLREDVAAREQTLGELQRRWE AERASVNRVGKLKDELNELRIRAERAQREGNLEKASRLLYGEIPVIEREVAQAEAAESVPSAEDRMVNEQVTAEDVAAVV AAWTGIPVGRLLQGETEKLLHLEQELGKRLIGQKQAVRAVADAVRRTRAGISDPDRPTGSFLFLGPTGVGKTELAKALAE FLFDDEKAMVRIDMSEYGEKFAVSRLVGAPPGYVGYEQGGQLTEAVRRRPYSVVLLDEVEKAHPEVFDVLLQVLDDGRLT DGQGRTVDFRNVILVLTSNLGSQFISDATLPLDQREQAVQQLVRQTFKPEFVNRLDDIVVFQTLSMDDLAQIVELYIDRL GVRLADRRLTLGVTPDARSWLAERGHDPLYGARPLRRLMQREIDDRLARELLAGDIRDGDAVRVDLAPDGDGLTVSRAWS DEPEDQAPGV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 1e-98 | 43 |
| aec27 | AAQ96721.1 | Aec27 | Not tested | AGI-1 | Protein | 2e-97 | 41 |
| aec27 | YP_851418.1 | ATPase | Not tested | PAI II APEC-O1 | Protein | 2e-97 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB | YP_007684624.1 | ATPase with chaperone activity, ATP-binding subunit | VFG0080 | Protein | 3e-127 | 44 |
| clpB | YP_007684624.1 | ATPase with chaperone activity, ATP-binding subunit | VFG2084 | Protein | 3e-105 | 44 |
| clpB | YP_007684624.1 | ATPase with chaperone activity, ATP-binding subunit | VFG2076 | Protein | 6e-111 | 43 |
