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Name : kdpB (CMN_02715) Accession : YP_007686954.1 Strain : Clavibacter michiganensis NCPPB 2581 Genome accession: NC_020891 Putative virulence/resistance : Unknown Product : potassium-transporting ATPase B chain, P-type ATPase Function : - COG functional category : - COG ID : - EC number : 3.6.3.12 Position : 2853276 - 2855426 bp Length : 2151 bp Strand : + Note : Cmm ortholog CMM_2752; Cms ortholog CMS_0461 DNA sequence : ATGACCGCCATGACCACCCCCGAGGCGCCGGCCGCTCCGGCTCCCGCGTCGCGCGCCCGGGCCATCGACGCCCGGCAGCT CGCCGAGGCGCTCCCCGGCGCGTTCCGGAAGCTGGATCCGCGCCTCATGTGGCGGAACCCGGTGATGCTGATCGTCGAGG TCGGCGCCGCGTTCACCACCGTCCTCGCCATCGCCGAGCCCTTCACGGGCGGCGCGGGATCCTCCGGCGGCAGCGCCGTG CCCGCGACCTTCACGGCCGGCATCGCCCTGTGGCTCTGGCTCACGGTCGTCTTCGCGAACCTCGCGGAGTCGGTGGCCGA GGGCCGCGGCAAGGCGCAGGCCGACAGCCTCCGCAAGACCCGCACGAGCACGATGGCGCACGTCGTCGCCTCCTACGACC AGGCTCGGGATCCCGGCGCCGAGCGCGCCGAGCTCCGTGAGGTCTCGAGCGCCGACCTCACGCTCGGTGACACGGTCGTC GTGGTCGCCGGGGAGTTGATCCCGGGCGACGGCGACGTCGTGTGGGGCATCGCCTCCATCGACGAGTCGGCCATCACGGG CGAGTCCGCGCCCGTGGTCCGCGAGTCCGGCGGCGACCGCAGCGCCGTCACCGGCGGCACGCGGGTGCTGAGCGACCGGA TCGTCGTGCGCATCACCTCGAAGCCCGGCGAGACCTTCGTCGACCGCATGATCGGCCTCGTCGAGGGCGCGTCGCGCCAG CGCACGCCGAACGAGATCGCGCTGAACATCCTGCTGGCGAGCCTCACGATCGTCTTCGTGGTCGTGGCGCTCACGCTCAA CCCGATCGCCTCCTACTCCGCAGCGACCGTGAGCGTGCCCGTGCTGATCGCGCTGCTCGTCTGCCTGATCCCCACCACCA TCGGGGCGCTGCTCTCCGCCATCGGCATCGCCGGCATGGACCGGCTCGTGCAGCGCAACGTGCTCGCGATGTCGGGCCGC GCGGTCGAGGCGGCCGGCGACGTCACCACGCTGCTCCTCGACAAGACCGGCACCATCACCTACGGCAACCGCCGCGCCAG CGAGCTCGTGGCCGTCGACGGCACGGGCGCCGAGGAGCTCGCCCGTGCCGCGGCCATGTCGTCGCTCGCGGACCCGACGC CGGAGGGATCCAGCGTCGTCGACCTCGCGGTCGCCCAGGGCCTCGACACCTCGACGCTGCCCCGCGGCGTCGACGTGCCG TTCACCGCGCAGACCCGCATGTCGGGCGTCGACCTGCCCGACGGCACGGTCGTCCGCAAGGGCGCGTCGTCCGCGGTCAT CGCGTGGCTCGAGGAGGGCGGGCGCCCGCTGCCCTCGACGCTGCACGCCGAGCTGACCGCGGCCGTCGAGGCCATCTCGA ACGGCGGCGGCACCCCGCTCGTCGTCGCGATGAAGGACCCGGCGGGCGCCGGCCGCGTGCTCGGCGTCGTGCACCTCAAG GACGTCGTGAAGGACGGCCTGAAGGAGCGCTTCGCGGAGCTGCGGGCCATGGGGATCCGCACGGTGATGATCACGGGCGA CAACCCGCTCACCGCCCGCGCCATCGCCGCCGAGGCCGGGGTGGACGACCACCTCGCCGAGGCCACGCCCGAGGACAAGC TCGCGCTCATCCGCAAGGAGCAGGAGGGCGGCCGCCTGGTCGCCATGACCGGCGACGGCACCAACGACGCGCCCGCGCTC GCGCAGGCCGACGTCGGCGTCGCGATGAACACGGGCACGTCGGCCGCGAAGGAGGCCGGCAACATGGTCGACCTCGACTC GGACCCGACGAAGCTCATCGACATCGTGCGGATCGGCAAGCAGCTGCTCATCACCCGCGGCGCGCTCACCACGTTCTCCA TCGCGAACGACGTGGCGAAGTACTTCGCGATCATCCCCGCGATGTTCACGGGCGTCTTCCCGCAGCTCGCGGTGATCAAC GTGATGCAGCTGCACTCGCCGGCGTCCGCGATCCTCTCGGCGATCATCTTCAACGCGCTGATCATCGTGGCGCTCATCCC GCTGGCCCTGAAGGGCGTCGCGTACCGGCCCCTCAGCGCCTCCAAGGTGCTCAGCCGGAACCTGCTCGTCTACGGGGTCG GCGGCGTGATCGCGCCGTTCATCGGCATCAAGCTCGTCGACCTCGTCGTCAGCCTGATCCCCGGCTTCTGA Protein sequence : MTAMTTPEAPAAPAPASRARAIDARQLAEALPGAFRKLDPRLMWRNPVMLIVEVGAAFTTVLAIAEPFTGGAGSSGGSAV PATFTAGIALWLWLTVVFANLAESVAEGRGKAQADSLRKTRTSTMAHVVASYDQARDPGAERAELREVSSADLTLGDTVV VVAGELIPGDGDVVWGIASIDESAITGESAPVVRESGGDRSAVTGGTRVLSDRIVVRITSKPGETFVDRMIGLVEGASRQ RTPNEIALNILLASLTIVFVVVALTLNPIASYSAATVSVPVLIALLVCLIPTTIGALLSAIGIAGMDRLVQRNVLAMSGR AVEAAGDVTTLLLDKTGTITYGNRRASELVAVDGTGAEELARAAAMSSLADPTPEGSSVVDLAVAQGLDTSTLPRGVDVP FTAQTRMSGVDLPDGTVVRKGASSAVIAWLEEGGRPLPSTLHAELTAAVEAISNGGGTPLVVAMKDPAGAGRVLGVVHLK DVVKDGLKERFAELRAMGIRTVMITGDNPLTARAIAAEAGVDDHLAEATPEDKLALIRKEQEGGRLVAMTGDGTNDAPAL AQADVGVAMNTGTSAAKEAGNMVDLDSDPTKLIDIVRIGKQLLITRGALTTFSIANDVAKYFAIIPAMFTGVFPQLAVIN VMQLHSPASAILSAIIFNALIIVALIPLALKGVAYRPLSASKVLSRNLLVYGVGGVIAPFIGIKLVDLVVSLIPGF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kdpB | NP_814334.1 | potassium-transporting ATPase subunit B | Not tested | Not named | Protein | 8e-165 | 58 |
| ef0088 | AAM75291.1 | EF0088 | Not tested | Not named | Protein | 6e-165 | 58 |
| kdpB | BAA82181.1 | potassium-transporting ATPase(B chanin) | Not tested | Type-II SCCmec | Protein | 2e-153 | 55 |
| kdpB | YP_251949.1 | potassium-transporting ATPase subunit B | Not tested | SCCmec | Protein | 6e-153 | 55 |
| SAR0071 | YP_039539.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 2e-153 | 55 |
| kdpB(SCCmec) | NP_370597.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 2e-153 | 55 |
| kdpB | NP_373310.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 2e-153 | 55 |
| kdpB | YP_190029.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 2e-153 | 55 |
