Gene Information

Name : CMN_02156 (CMN_02156)
Accession : YP_007686419.1
Strain : Clavibacter michiganensis NCPPB 2581
Genome accession: NC_020891
Putative virulence/resistance : Resistance
Product : sodium:solute symporter, SSS family
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2287435 - 2289057 bp
Length : 1623 bp
Strand : +
Note : Cmm ortholog CMM_2188; Cms ortholog CMS_2221

DNA sequence :
ATGAGCGCCGCGACGACGGCTGTGATGGCGACGACGCCCACCACCGACACGGGCGACCCCGTCCTCAACATCTCGATCTT
CGGGGCGTTCGTGGTCATCACGCTCGTGATCGTGTTCCGGGCGAGCCGGAACAACTCGACGGCCGCCGACTACTACGCGG
CCGGCCGCTCGTTCACCGGGCCGCAGAACGGCACGGCGATCGCGGGCGACTACCTCTCGGCGGCGTCGTTCCTCGGGATC
GTCGGCGCCATCGCCATCAACGGGTACGACGGGTTCCTGTACTCGATCGGGTTCCTGGTCGCGTGGCTCGTGGCGCTGCT
GCTCGTGGCCGAGCTCATGCGCAACACGGGCAAGTTCACGATGGCCGACGTGCTGAGCTTCCGGCTCAAGCAGCGGCCCG
TGCGGCTCGCGGCGGCGACCACGACGCTCGCGGTCTGCTTCTTCTACCTGCTCGCGCAGATGGCGGGCGCGGGCGGGCTC
GTCTCGCTGCTGCTCGGGATCGACGACCGGCTCGGGCAGTCGCTCGTGATCGCGGTCGTGGGCGCGCTCATGATCGTCTA
CGTGCTCGTCGGCGGGATGAAGGGCACGACCTGGGTGCAGATCATCAAGGCCTGCCTGCTCATCGCGGGCGCGGCCGTGA
TGACCGTGTGGGTACTCGCGATCCACGGGTTCAACGTGTCGGAGCTGCTGGGCGCGGCGGCCGCCGCGACCGACAAGCCC
GTGCTCGAGCCGGGCAACCAGTACGGCCTCACCGGCATCACGAAGCTCGACTTCCTGTCGCTCGCCCTGGCGCTGGTGCT
CGGGACGGCGGGCCTCCCCCACGTGCTCATGCGCTTCTACACGGTGCCGACCGCGAAGGAGGCCCGTCGCAGCGTCGTCT
GGGCGATCTGGCTCATCGGGATCTTCTACCTCTTCACCCTGGTGCTCGGGTACGGCGCGGGTGCTCTGCTCGGGAGCGAG
CGGATCCTCGCGGCTCCCGGCGGCGTGAACTCCGCGGCGCCGCTGCTGGCGCTCGAGCTCGGCGGGCCGATCCTGCTCGG
GATCATCGCGGCGGTCGCGTTCGCGACGATCCTCGCGGTGGTCGCGGGGCTCACCATCACGGCGGCGGCCTCCTTCGCGC
ACGACGTGTACGGCAGCGTCATCAAGAAGGGGCAGGTCTCGGCGAACGGCGAGGTGCGGGTCGCGCGGATCACGGTGGTC
GTGATCGGCATCGTCTCGATCATCGCGGGCATCGGCGCGAACGGGCAGAACGTCGCGTTCCTCGTGGCGCTCGCGTTCGC
GGTGGCGGCGAGCGCGAACCTGCCGACGATCCTCTACTCCCTCTACTGGCGGCGCTTCTCCACCCGGGGCGCGGTGCTCA
GCATGTACGGCGGGCTCGGGACGGCGCTCGTACTGATCGCGTTCTCGCCCGTGGTCTCGGGCGCCGAGACGTCGATGATC
CCGGGGGCCGACTTCTCGTGGTTCCCGCTGAGCAACCCGGGGATCGTGTCGATCCCCGTCGGGTTCCTGCTCGGCTGGAT
CGGGACGGTGACCTCGACGCGCAAGGAGGACCCGCTCGTCGCGGCCGAGATGGACGTGCGGTCGCTGACCGGGCACGGCG
CGGAGAAGGCGACGGAGCACTAG

Protein sequence :
MSAATTAVMATTPTTDTGDPVLNISIFGAFVVITLVIVFRASRNNSTAADYYAAGRSFTGPQNGTAIAGDYLSAASFLGI
VGAIAINGYDGFLYSIGFLVAWLVALLLVAELMRNTGKFTMADVLSFRLKQRPVRLAAATTTLAVCFFYLLAQMAGAGGL
VSLLLGIDDRLGQSLVIAVVGALMIVYVLVGGMKGTTWVQIIKACLLIAGAAVMTVWVLAIHGFNVSELLGAAAAATDKP
VLEPGNQYGLTGITKLDFLSLALALVLGTAGLPHVLMRFYTVPTAKEARRSVVWAIWLIGIFYLFTLVLGYGAGALLGSE
RILAAPGGVNSAAPLLALELGGPILLGIIAAVAFATILAVVAGLTITAAASFAHDVYGSVIKKGQVSANGEVRVARITVV
VIGIVSIIAGIGANGQNVAFLVALAFAVAASANLPTILYSLYWRRFSTRGAVLSMYGGLGTALVLIAFSPVVSGAETSMI
PGADFSWFPLSNPGIVSIPVGFLLGWIGTVTSTRKEDPLVAAEMDVRSLTGHGAEKATEH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1523 YP_001800917.1 transporter Not tested Not named Protein 9e-96 65
unnamed AAK01502.1 putative amino acid transport protein Not tested PAGI-1 Protein 3e-36 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CMN_02156 YP_007686419.1 sodium:solute symporter, SSS family BAC0564 Protein 2e-47 46
CMN_02156 YP_007686419.1 sodium:solute symporter, SSS family BAC0570 Protein 1e-41 43