Gene Information

Name : pdxS (CMN_01796)
Accession : YP_007686069.1
Strain : Clavibacter michiganensis NCPPB 2581
Genome accession: NC_020891
Putative virulence/resistance : Unknown
Product : pyridoxal biosynthesis lyase PdxS
Function : -
COG functional category : -
COG ID : -
EC number : 4.-.-.-
Position : 1886490 - 1887392 bp
Length : 903 bp
Strand : -
Note : Cmm ortholog CMM_1819; Cms ortholog CMS_0713

DNA sequence :
ATGACTGACACCAACACCCCCGGACAGGTCGGCTCGAGCCGCGTCAAGCGCGGACTCGCGGAGATGCTCAAGGGCGGCGT
CATCATGGACGTCGTCACCGCCGAGCAGGCGCGCATCGCGGAGGACGCGGGAGCGGTCGCCGTCATGGCGCTCGAGCGCG
TCCCCGCCGACATCCGCTCGCAGGGCGGCGTCGCCCGCATGAGCGACCCCGACCTCATCGACCAGATCAAGGCCGAGGTC
TCCATCCCCGTCATGGCGAAGGCCCGCATCGGCCACTTCGTCGAGGCGCAGGTCCTCCAGTCCCTCGAGGTCGACTACAT
CGACGAATCCGAGGTGCTGAGCCCGGCCGACTACGTGAACCACATCGACAAGTGGGGCTTCACCGTCCCCTTCGTCTGCG
GTGCCACCACGCTCGGCGAGGCGCTCCGCCGCATCACCGAGGGCGCGGCCATGATCCGCTCCAAGGGCGAGGCCGGCACG
GGCGACGTCTCCGAGGCCACCAAGCACATCCGCACCATCAAGTCCGAGATCCGCGCGCTCAGGGCCCTCACGCACGACGA
GATCTACGTCGCCGCGAAGGAGCTGCAGGCGCCGTACGACCTCGTGCTCGAGGTCGCCACGACGGGTCAGCTCCCCGTCG
TCCTCTTCACCGCGGGCGGCGTGGCCACCCCTGCGGACGCCGCGATGATGATGCAGCTCGGCGCCGACGGCGTGTTCGTC
GGATCCGGCATCTTCAAGTCCGGCAACCCGGTCGCGCGCGCGAAGGCGGTCGTCACGGCCACCGCGCTGTTCAACGACCC
CGACGCCATCGCCGAGGCGTCGCGCGGGCTGGGCGAGGCCATGGTCGGGATCAACGTCGCCGACGTCCCCGCCCCGCACC
GCCTCGCCGAGCGTGGCTGGTAG

Protein sequence :
MTDTNTPGQVGSSRVKRGLAEMLKGGVIMDVVTAEQARIAEDAGAVAVMALERVPADIRSQGGVARMSDPDLIDQIKAEV
SIPVMAKARIGHFVEAQVLQSLEVDYIDESEVLSPADYVNHIDKWGFTVPFVCGATTLGEALRRITEGAAMIRSKGEAGT
GDVSEATKHIRTIKSEIRALRALTHDEIYVAAKELQAPYDLVLEVATTGQLPVVLFTAGGVATPADAAMMMQLGADGVFV
GSGIFKSGNPVARAKAVVTATALFNDPDAIAEASRGLGEAMVGINVADVPAPHRLAERGW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pdxS YP_005137204.1 pyridoxine biosynthesis protein Not tested Not named Protein 5e-112 83
DIP0227 NP_938620.1 pyridoxal biosynthesis lyase PdxS Not tested Not named Protein 4e-112 83
pdxS YP_005141805.1 pyridoxine biosynthesis protein Not tested Not named Protein 6e-112 83