Gene Information

Name : pykA (CMN_01738)
Accession : YP_007686011.1
Strain : Clavibacter michiganensis NCPPB 2581
Genome accession: NC_020891
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : 2.7.1.40
Position : 1823412 - 1824857 bp
Length : 1446 bp
Strand : -
Note : Cmm ortholog CMM_1758; Cms ortholog CMS_2004

DNA sequence :
ATGACCAGACGAGCGAAGATCGTCGCGACCCTCGGGCCCGCGACCAGCTCCTACGAGAGCATCCGCGCCATCATCGACGC
CGGCGTGGACGTGGCCCGGATGAACCTCAGCCACGGCACCTACGACGTCCACGAGGGCATCTACTCCACCATCCGGAAGG
CCGCCGACGACGCGGGCCGCGCGGTCGCGGTCCTGGTCGACCTGCAGGGCCCGAAGATCCGGCTCGGCAAGTTCTCCGAC
GGCCCGCACGACCTGGCGTTCGGCGACACCTTCGTCATCACGGTCGAGGACATCCTCGGCACCAAGGACATCTGCTCCAC
CACGTACAAGGGCCTCCCGGGCGACGTGAAGCCGGGCGACCCGCTGCTCATCGACGACGGCAAGGTCACCCTCCGCGTGG
TCTCCACCGACGGTACCCGCGTCACGACCACGGTCGAGGTGGCCGGGGCGGTCAGCAACAACAAGGGCATCAACCTCCCG
GGCGTGGCGGTCAACGTGCCCGCGCTGTCCGAGAAGGACGAGGCGGACCTCCGCTGGGGCCTGCGCCTCGGCGCCGACCT
CATCGCGCTGAGCTTCGTTCGCGACGCCTCGGACATCGTCCGCGTGCACGAGATCATGGATGAGGAGGGCCGCCGCGTCC
CCGTCGTCGCCAAGGTCGAGAAGCCGCAGGCCGTGGACGCGCTCGAGGAGATCGTCGACGCCTTCGACGCCATCATGGTC
GCCCGCGGCGACCTGGGAGTCGAGCTCCCGCTCGAGGCCGTGCCGATCGTGCAGAAGCGCGCGGTCGAGCTGGCCCGCCG
CAAGGCGAAGCCCGTCATCGTCGCGACGCAGATGCTGGAGTCCATGATCACGAGCCCCCGTCCCACCCGCGCGGAGGCCT
CCGACTGCGCCAACGCGGTGCTCGACGGCGCCGACGCGCTAATGCTGAGCGGCGAGACGAGCGTGGGCGAGTTCCCCGTC
GTCACCGTGAAGACCATGGCCCGCATCATCGAGTCGACCGAGGAGCACGGGCTGGAGCGCATCCCGAAGCTCGGCACGCG
CCCCTTCACGCAGGGCGGCGCCATCACCCTCGCGGCCGCCGAGGTCGCCGAGTTCGTCGAGGCAAAGGCGCTCTGCGTCT
TCACCGAGTCGGGCGACTCCGTGCGTCGCATGACGCGCCTGCGCAACGGCATCCCGATCCTCGCGTTCACGCCGAACGAG
GGCATCCGCCGTCGCCTGGCCCTGTCGTGGGGCGTGCAGACGTACCTCGTCGAGCCCGTCACGCACACCGACCAGATGTT
CCACCAGGTCGACGAGGTCCTCCTCGCGGAGGGCCTCGCGGAGGTCGGACAGAAGGTCGTCGTCATCGCCGGGTCCCCTC
CCGGGATCGCGGGCTCCACGAACGAGCTGCGCGTCCACGTCGTCGGCGACGCCGTGAACGAGGCCGCTCCCGCGTACGAG
AAGTAG

Protein sequence :
MTRRAKIVATLGPATSSYESIRAIIDAGVDVARMNLSHGTYDVHEGIYSTIRKAADDAGRAVAVLVDLQGPKIRLGKFSD
GPHDLAFGDTFVITVEDILGTKDICSTTYKGLPGDVKPGDPLLIDDGKVTLRVVSTDGTRVTTTVEVAGAVSNNKGINLP
GVAVNVPALSEKDEADLRWGLRLGADLIALSFVRDASDIVRVHEIMDEEGRRVPVVAKVEKPQAVDALEEIVDAFDAIMV
ARGDLGVELPLEAVPIVQKRAVELARRKAKPVIVATQMLESMITSPRPTRAEASDCANAVLDGADALMLSGETSVGEFPV
VTVKTMARIIESTEEHGLERIPKLGTRPFTQGGAITLAAAEVAEFVEAKALCVFTESGDSVRRMTRLRNGIPILAFTPNE
GIRRRLALSWGVQTYLVEPVTHTDQMFHQVDEVLLAEGLAEVGQKVVVIAGSPPGIAGSTNELRVHVVGDAVNEAAPAYE
K

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pykF YP_216386.1 pyruvate kinase Not tested SPI-2 Protein 3e-71 41
pykF NP_805051.1 pyruvate kinase Not tested SPI-2 Protein 3e-71 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
pykA YP_007686011.1 hypothetical protein VFG0479 Protein 1e-71 41