Gene Information

Name : CMN_00170 (CMN_00170)
Accession : YP_007684518.1
Strain : Clavibacter michiganensis NCPPB 2581
Genome accession: NC_020891
Putative virulence/resistance : Unknown
Product : putative peptide ABC transporter, ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 163462 - 165192 bp
Length : 1731 bp
Strand : -
Note : Cmm ortholog CMM_0230; Cms ortholog CMS0798

DNA sequence :
ATGATGCCCGGCAACGTCGAGGACACCCTCACCGGCCAGGTGCGGCTCGGCACCGTCGTGCGCGTCGCCGACCTCGCCAT
CTCGTACGCGGCCGGGCGCACCGACGTGCCCGTCGTCCGCGGCGTCAGCTTCGAGATCCGCGCCGGGCGCGCGCTCGGGC
TCGTCGGGGAGTCGGGGAGCGGGAAGTCGACGGTCGCGCGGACGCTGCTCGCGCACCTGCGCCGCGGCTCCCGCATCGTG
GGCGGATCCGTCGAGGTCGCCGGGCAGGACGTCTTCGCCCTCTCCCCCGCCGCGACACGCGAGCTGCGCGGCGGCACCGC
GGCTGTCGTCGCGCAGAACGCCGGCCAGGCGCTCACGCCCTCGATGCGCGTGGGCCGCCAGCTCCGCGAGGCGCTCGAGA
GCCACGGGCTCCCGAGCGACGACGAGCGGGTCCAGGAGCTGATCCGCCTCGTGCGCCTGCCCGACCCCGCCACCCTCGTG
CGGCGGTACCCGCACCAGCTCTCCGGCGGGCAGCAGCAGCGCATCGCGATCGCCATGGCCGTCGCCGCGCGCCCCCGGGT
GCTCGTGCTCGACGAGCCGACGACCGCGCTCGACGTGGTGACGCAGGCGGCCGTGCTGACCCTGATCCGCGACCTCGCCC
GCGAGCTCGGCATGGCCGTGCTGCTCGTCAGCCACGACCTCGGCGTCGTCTCGACGATGGTCGACGAGATCGCCGTGATG
CGCGACGGCGTCATCGTGGAGCACCGGCCGACCGCGGAGCTGTTCGCGTCGCCGGAGCACGCGTACACGCGCGAGCTGCT
GGCGGCGATCCCCGGGGGCGCCGGCCCGGTCGCCCCTGCCCACGCCGACGCCGCGGCCCCGATGGTCGTCGCCGACGGCC
TCGTCGTCCGCTACGGCCGCGGCCTGCCGCCCGCGGTGTCCGACGTCTCGTTCGAGATCGCGCCGCGCGAGACGCTCGCG
GTCGTCGGCGAGTCCGGCAGCGGCAAGACCACGCTCGCGACCGCCCTCGCCGGGCTGGTGCCCACCGAGTCGGGCACCTT
CCGCTTCCAGGGCGAGGGGGTCTCGGGCGACCTGACCTCCGCGGTCGCCGGCCGCTCGCCCGCCCTCCGGCGCGCGGTGC
AGCTCGTGTTCCAGAACGCGGACACCTCGCTCAACCCGCGTCGGACGGTCGGCGCGGCGATCGCCCGGCCGCTCGAGCTC
TTCACGGGCCGGGCCTCGGCCGAGCGCGTGGGCGAGATCCTCACCGAGGTGGGGCTGTCGCCGGACTTCGCGGCCCGGCT
GCCGAGCCAGCTCTCGGGCGGCCAGCGGCAGCGCGTCGGGATCGCCCGGGCGCTGGCCGCGGGGCCGCAGCTCGTAATCG
CGGACGAGATCACGACCGCGCTCGACGTGCGCGTGCAGGCCGAGATCCTGGAGCTGCTCGCCCGCCTGCAGCGCGACAAG
GGCCTCAGCTGCCTCTTCATCAGCCACGACCTCGCCGTGGTCCGCGGCGTCGCGGACCGCGTGGCCGTGATGACCGGCGG
GCGGATCGTGGAGATCGGCCCGACCGAGCGGGTGTTCCAGGGGCCGAACCACCCCTACACGCGGCAGCTGCTCGCCGCGA
CGCTCGAGCCCGGCGCCACCGAGCTGCCGCGGGTGGAGGACGTGACGGCCACCTGGCGCGACGTCGCCGGGGGAGGGTGG
AGGGAGCTCGACGACGGGCACCGGATCCGGGACTGGGAGGACGCACGATGA

Protein sequence :
MMPGNVEDTLTGQVRLGTVVRVADLAISYAAGRTDVPVVRGVSFEIRAGRALGLVGESGSGKSTVARTLLAHLRRGSRIV
GGSVEVAGQDVFALSPAATRELRGGTAAVVAQNAGQALTPSMRVGRQLREALESHGLPSDDERVQELIRLVRLPDPATLV
RRYPHQLSGGQQQRIAIAMAVAARPRVLVLDEPTTALDVVTQAAVLTLIRDLARELGMAVLLVSHDLGVVSTMVDEIAVM
RDGVIVEHRPTAELFASPEHAYTRELLAAIPGGAGPVAPAHADAAAPMVVADGLVVRYGRGLPPAVSDVSFEIAPRETLA
VVGESGSGKTTLATALAGLVPTESGTFRFQGEGVSGDLTSAVAGRSPALRRAVQLVFQNADTSLNPRRTVGAAIARPLEL
FTGRASAERVGEILTEVGLSPDFAARLPSQLSGGQRQRVGIARALAAGPQLVIADEITTALDVRVQAEILELLARLQRDK
GLSCLFISHDLAVVRGVADRVAVMTGGRIVEIGPTERVFQGPNHPYTRQLLAATLEPGATELPRVEDVTATWRDVAGGGW
RELDDGHRIRDWEDAR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
oppDF2 YP_005686002.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 7e-65 42
oppDF2 YP_005681814.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 7e-65 42
oppDF2 YP_005683914.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 7e-65 42
cpfrc_01561 YP_003783961.1 hypothetical protein Not tested PiCp 6 Protein 7e-65 42