Gene Information

Name : rph (CMN_01265)
Accession : YP_007685551.1
Strain : Clavibacter michiganensis NCPPB 2581
Genome accession: NC_020891
Putative virulence/resistance : Unknown
Product : ribonuclease PH
Function : -
COG functional category : -
COG ID : -
EC number : 2.7.7.56
Position : 1305314 - 1306051 bp
Length : 738 bp
Strand : +
Note : Cmm ortholog CMM_1295; Cms ortholog CMS_2100

DNA sequence :
ATGACCGACGACACCCCCCGCCACGACGGCCGCGCCGCCGACGAGCTGCGCGAGATCACGATCGAGCGGAACTGGAGCGA
GCAGGCCGAGGGATCCGCCCTCATCTCCTTCGGCCGCACCCGCGTCCTCTGCACCGCGTCCTTCACCAACCGCGTCCCGC
GCTGGAAGGCCGGCAGCGGCCAGGGCTGGGTCACCGCCGAGTACGCGATGCTCCCGCGCGCCACGAACGAGCGCATGGAC
CGCGAGGCCGTGAAGGGCAAGGTCGGCGGCCGCACGCACGAGATCTCCCGCCTCATCGGCCGCAGCCTCCGCGCGGTCGT
CGACATGAAGGCGCTCGGGGAGAACACGATCGTCATCGACTGCGACGTTCTGCAGGCCGACGGCGGCACGCGCACCGCCG
CCATCACGGGCGCGTACGTCGCCCTCGCCGACGCGCTCGAGTGGGGCCGCGAGAGGAAGTTCATCGCGCAGCGCGCGACG
CCGCTGAAGGACAGCGTCGCCGCGGTCTCCGTCGGCATCGTCGACGGGAAGTCGCTGCTCGACCTCGCGTACGTCGAGGA
CGTGCGCGCCGAGACCGACATGAACGTGGTGATGACGGGCAGCGGGTCCTTCGTCGAGGTCCAGGGCACGGCCGAGGGCG
CGCCCTTCGACCGCGCCGAGCTCGACGCCCTCCTCGACCTCGCGCTCAGCGGCGGCACCACGCTCACCGCGCTGCAGGCG
CAGGCGCTCGGCCGCTGA

Protein sequence :
MTDDTPRHDGRAADELREITIERNWSEQAEGSALISFGRTRVLCTASFTNRVPRWKAGSGQGWVTAEYAMLPRATNERMD
REAVKGKVGGRTHEISRLIGRSLRAVVDMKALGENTIVIDCDVLQADGGTRTAAITGAYVALADALEWGRERKFIAQRAT
PLKDSVAAVSVGIVDGKSLLDLAYVEDVRAETDMNVVMTGSGSFVEVQGTAEGAPFDRAELDALLDLALSGGTTLTALQA
QALGR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rph YP_001800860.1 ribonuclease PH Not tested Not named Protein 1e-63 66