Gene Information

Name : TOL_3129 (TOL_3129)
Accession : YP_007683762.1
Strain : Thalassolituus oleivorans MIL-1
Genome accession: NC_020888
Putative virulence/resistance : Virulence
Product : DNA mismatch repair protein MutS
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3282691 - 3285267 bp
Length : 2577 bp
Strand : +
Note : -

DNA sequence :
ATGAGTCAGGCCAGCGCCCATACCCCGATGATGCAGCAATACCTCAAGATTAAGGGGGAGTTTGCGGATACGATTCTGTT
CTATCGTATGGGCGATTTTTACGAGCTGTTCTTTGATGACGCTAAGCGCGCGGCGCAGTTGCTGGATATCACCTTAACCG
CGCGTGGTCAGAGCGGTGGTAAGCCAATTCCGATGGCAGGTGTGCCTTATCATGCGGCGGAAAACTACATTGCTAAGCTG
GTGCGCCAAGGGGTGTCGGTAGCGATTGCTGAGCAAATCGGTGACCCCGCCACCAGTAAAGGGCCGGTTGAGCGCAAGGT
AGTGCGTATTCTTACGCCGGGTACCCTGACCGACGAAGCCTTTCTGGATGAACGCCAAGATAACTTATTAGTAGCGCTGT
GTTCATCCAAGCAACGTCATGGCTTAGCGGTATTGGAAATAAGCAGTGGTCGCTTTACGGTAATGGAGGTCGATGGCGAA
GCAGCGCTGTTAGCCGAAATTGAGCGCTTACGCCCTGCCGAGTTATTGCTGGCCGAAGATCAAGATATTGCGGATGAGAT
AAGTGAGCGCGCGGGCAGTAAAATGCTTGCGCCGTGGCATTTCGAAAGCGATACCGCGCTGCGTTTATTAACCGAACAAT
TAAAAACTCGCGATTTACGCGGCTTTGGTTGCGAAGGTATGACGGTGGCAATTCGCGCCGCCGGTGCCTTGTTGCATTAT
GCCCAAGATACCCAGCGCAATAGCCTGCCGCACATACGTTCGATTGCGGTTGAGCAAGCCAGCGATGCCATTATTATCGA
CCCCGCCAGTCGCCGTAATTTAGAAATCGATATTAATCAAAAAGGCGATTCGCTTTATACACTCGCATGGGTGATGGATA
AAACCGCTACAGCAATGGGCAGTCGCTTATTACGTCGTTGGTTAAATCGACCGCTACGTGATCGCGCACTACTGCAACAA
CGCCAAGGCTTAATCGCCCAGTGTTTGCAACATTATGCCTGGGAAGATTTACACAAAGCCTTACGCCAAGTAGGCGACGT
TGAACGTATTTTATCGCGTGTGGCGCTGGGTTCTGCCCGCCCGCGTGATCTCGCACGCTTGCGCGATGCGTTAACCGTGA
TTCCGGAAATTCGCCAGCATTTAAGCGGCCTAGATGGCGAGCTAGCCGCAGGCATTGCTAAGCGTGCGCCGGAGTTTCCG
CAATGGGTTGAGCGCTTAACGAAAGCGATTATTGAAAACCCACCCGTGATTATTCGTGATGGTGGCGTGATTGCCGAAGG
CTACGATAGCGAATTAGATGAGCTGCGTTCACTGAGCGAAAACGCGGGCGATTATCTAGTTAAGCTAGAGCAAGAAGAGT
TGGCGCGCACTGGCTTAAGTACGTTAAAAGTCGGCTATAACCGTGTGCATGGCTATTACATCGAAATCAGTAAATCCCAA
GCCGAAAAGGCACCGGTCGAATACATTCGTCGCCAAACATTAAAAAATGCCGAACGATTTATTACTCCAGAATTAAAAGC
ATTTGAAGATAAAGCGTTAAGTGCCAAAAGCCGTTCGCTCAGCCGTGAAAAATTTTTATACGAAGAATTATTAACCGCAC
TGGCCGAGGATTTAATTCCACTGCAAGTCTGCGCTGCGGCACTATCGGAGCTGGATGTTTTGGTGTGTTTTGCCGAGCGT
GCCGATAGCCTGCGTTTAACTCAACCAGAGCTGGTCGACGAAAGCCGCTTGGAAATTATCCAAGGTCGTCATCCTGTAGT
GGAAAGCTTAATTACCGATCCATTTGTTGCCAACAATACGTCGCTGACGAATGATCGACGCATGCAGATCATTACCGGCC
CAAACATGGGCGGTAAATCGACCTACATGCGTCAAGTCGCGGTCATTACTTTGCTGGCTCATGTCGGCAGTTATGTGCCC
GCAGAATCGTGCCGACTCGGGCCGATTGATCGTATCTTTACCCGTATGGGGTCAGCAGATGATGTCGCCGGTGGTCGTTC
GACCTTTATGGTAGAAATGACCGAAACGGCCAATATTTTACACAATGCCACGCGCGACAGTTTGGTATTGATGGATGAAG
TCGGTCGCGGCACCAGCACCTTTGATGGCTTGTCTTTGGCTTGGGCGGCTGCCGCGCATTTAGCCGATGAGACCGAAGCT
TTCACCCTGTTCGCAACCCACTACTTCGAGATGACGGCCCTGCCCGAGCAGCACCCAACCGCCGTTAACGTGCATCTTAA
AGCCACCGAACATGACGAGCGTATTATCTTTATGCACTCCGTCGAAGATGGTCCTGCGAGTCAGAGCTACGGTCTACAAG
TTGCCCAACTGGCGGGGGTTCCAGCTACGGTTATTCAACAAGCGCGGGCGCAATTGCAACTTCTTGAAAAAGGCAGTCAC
GACCTAGCGGCACCAGTTAAAACCACCAGCAAAACAGCGAAAGTGTTGCCACTGCAAAACGATTTATTTGCGGCCGCCCC
CTCGATTGTGGAGGAGAAATTGGCGGGCATTAGCCCTGATGATTTATCACCTCGGCAGGCGCTTGAACTGCTCTATCAAT
TGAAAGGGCTGCTCTAA

Protein sequence :
MSQASAHTPMMQQYLKIKGEFADTILFYRMGDFYELFFDDAKRAAQLLDITLTARGQSGGKPIPMAGVPYHAAENYIAKL
VRQGVSVAIAEQIGDPATSKGPVERKVVRILTPGTLTDEAFLDERQDNLLVALCSSKQRHGLAVLEISSGRFTVMEVDGE
AALLAEIERLRPAELLLAEDQDIADEISERAGSKMLAPWHFESDTALRLLTEQLKTRDLRGFGCEGMTVAIRAAGALLHY
AQDTQRNSLPHIRSIAVEQASDAIIIDPASRRNLEIDINQKGDSLYTLAWVMDKTATAMGSRLLRRWLNRPLRDRALLQQ
RQGLIAQCLQHYAWEDLHKALRQVGDVERILSRVALGSARPRDLARLRDALTVIPEIRQHLSGLDGELAAGIAKRAPEFP
QWVERLTKAIIENPPVIIRDGGVIAEGYDSELDELRSLSENAGDYLVKLEQEELARTGLSTLKVGYNRVHGYYIEISKSQ
AEKAPVEYIRRQTLKNAERFITPELKAFEDKALSAKSRSLSREKFLYEELLTALAEDLIPLQVCAAALSELDVLVCFAER
ADSLRLTQPELVDESRLEIIQGRHPVVESLITDPFVANNTSLTNDRRMQIITGPNMGGKSTYMRQVAVITLLAHVGSYVP
AESCRLGPIDRIFTRMGSADDVAGGRSTFMVEMTETANILHNATRDSLVLMDEVGRGTSTFDGLSLAWAAAAHLADETEA
FTLFATHYFEMTALPEQHPTAVNVHLKATEHDERIIFMHSVEDGPASQSYGLQVAQLAGVPATVIQQARAQLQLLEKGSH
DLAAPVKTTSKTAKVLPLQNDLFAAAPSIVEEKLAGISPDDLSPRQALELLYQLKGLL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
mutS AAA80578.1 DNA mismatch repair protein Virulence SPI-1 Protein 0.0 55

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
TOL_3129 YP_007683762.1 DNA mismatch repair protein MutS VFG0562 Protein 0.0 58