|
Name : topC (TOL_0295) Accession : YP_007680983.1 Strain : Thalassolituus oleivorans MIL-1 Genome accession: NC_020888 Putative virulence/resistance : Unknown Product : DNA topoisomerase III Function : - COG functional category : - COG ID : - EC number : - Position : 313606 - 315612 bp Length : 2007 bp Strand : + Note : - DNA sequence : ATGCGCCTGATTATTGCCGAGAAACCAAGCTTAGGCCGCGCAATTGCAGCGGTGCTTCCTCAGCCTCACAGTAAAGGCGA AGGCTTTGTGCGCGCTGCCAACGGCGATGTGGTGAGCTGGTGTATAGGCCATCTATTAGAGCAAGCTCAGCCAGAAGCCT ATAACCCCCAATATAAACAGTGGCGGTTAGATCACTTACCAATTGTTCCTAATGAATGGCAGCTTGAAGCTAAGGCGCAA ACTCGCAAGCAATTAAGCGTATTGCGTAAACTGGTTAAAGAAGCAGATAGCATAGTGCACGCGGGAGACCCAGATCGTGA GGGGCAACTATTAGTAGACGAGGTTATTGCCTTTTTAAAAGTGCCAGCGACAAAACGCTCATCCATGCAGCGTTTATTGG TGAGTGATTTAAATCCCCAAGCGGTCACCCGCGCCTTGCAACAGCTACGTCCTAATAAGGATTTTATTCCGCTGTCTGTA TCGGCTTTGGCGCGCTCTCGTGCCGATTGGTTATACGGAATTAATTTAACCCGAGCTTATACGTTAAAAGGCCAACAGGG CGGTTTGAAAGCGGTGTTGTCAGTCGGTCGCGTGCAGACACCAATTCTAGGTTTAATTGTGCGCCGAGATAATGAAATTG CCGACTTTATTAGCAAGCCATTTTATGAAGTGTTCGCGGCGCTACATTTAAATGCCGAACAGCCGCTGAGTTTTTATGCA AAGTGGCTACCCAGCGAATCTTGCCAAGCGCACCAAGATGATGAGGGCCGTGTACTGAATCCTAAGCTTGCACATAATGT CGCTCAACGTATTCGCCAGCAAGCGGCAAGCGTGACCAGTATTGAGCGAAAATTAAAAAAACAAGCAGCACCCTTGCCGT ATAATTTATCGTCGCTGCAAATTGATGCGGCAAAAGCCTTCGGTTTAAGTGCGCAGCAAGTATTAGATAGCTGCCAATCG CTATACGAAAAACATCAGCTAATTACTTACCCGCGTTCCGATTGCCGTTATTTACCGACAGAACATTATGCGCGTCGCAG TGTGGTATTGTCCGCCATTGCTAACAGTGCCAATGAACTGGCTAGTGGAGTAGCACAAGCTGACACGCAATATCGCAGTA AAGCGTGGGACGATAAAAAGGTGGAAGCGCATCATGCGATAATTCCTACCGAAAAATCGTTGGATATTCAGCGTTTATCA AGGTATGAGCAGAAAGTTTACCAATTGATTGCGCGCCAATATGTGATGCAGTTTTATCCTGCGTTCGAATATGCCGATAC GCGCATTGAATTAGATATTGCCGGTGGTGTGTTTGTCGCCACCGAGCGAGAAACGATAAAACTCGGTTGGAAACAACTGC TTCCAGCTCGTAAACAGTCGGATCAAAACGCCGATCAAGATCCAAGTCGCCCATCGTTGCCTAAATTAGAAAAGGGGCAA GTCCTGTGGAGTGGCGAACCGGATGTGCAAGAAAAGAATACTCAGCCACCGGCGTATTTTACCGATGCTACTCTGCTGGC GGCAATGACAGGCATTGCTCGTTTTGTTACAGATTCTGAATTGAAAAAAATATTAAAAGAAACCGACGGTCTCGGTACCG AAGCGACGCGCGCCGGAATCATTGAACTGCTTTTTAAACGCCGATTTCTACAGCGTGAAGGAAAAAGTATTCGCGCAACC GATTTAGGTAAAGCGCTGGTAGCGGCCTTGCCCGAAGCCTGTACCTTGCCGGATATGACTGCCCAGTGGGAAAAGCAATT AAATGACATTACCCAAAAGCTATTAAACTACGATCAATTTATGCAACCTCTTGCTCTTCAATTAGACGCATTAATTAACC AAGCCAAGCAGCTAGATATCGGACGTTTTGGTGGCATTTCCATGCCTGCGTTTAAACCAAGAAAAGGCGGCTCTGCAGTA AGAAAGTCGACGGCACCGCGCAAGTCAGCTAGCACAGATAAATCAACTAGGTCGATTAAATCAAAGCGCAAACCTAAAGC TTGGTAA Protein sequence : MRLIIAEKPSLGRAIAAVLPQPHSKGEGFVRAANGDVVSWCIGHLLEQAQPEAYNPQYKQWRLDHLPIVPNEWQLEAKAQ TRKQLSVLRKLVKEADSIVHAGDPDREGQLLVDEVIAFLKVPATKRSSMQRLLVSDLNPQAVTRALQQLRPNKDFIPLSV SALARSRADWLYGINLTRAYTLKGQQGGLKAVLSVGRVQTPILGLIVRRDNEIADFISKPFYEVFAALHLNAEQPLSFYA KWLPSESCQAHQDDEGRVLNPKLAHNVAQRIRQQAASVTSIERKLKKQAAPLPYNLSSLQIDAAKAFGLSAQQVLDSCQS LYEKHQLITYPRSDCRYLPTEHYARRSVVLSAIANSANELASGVAQADTQYRSKAWDDKKVEAHHAIIPTEKSLDIQRLS RYEQKVYQLIARQYVMQFYPAFEYADTRIELDIAGGVFVATERETIKLGWKQLLPARKQSDQNADQDPSRPSLPKLEKGQ VLWSGEPDVQEKNTQPPAYFTDATLLAAMTGIARFVTDSELKKILKETDGLGTEATRAGIIELLFKRRFLQREGKSIRAT DLGKALVAALPEACTLPDMTAQWEKQLNDITQKLLNYDQFMQPLALQLDALINQAKQLDIGRFGGISMPAFKPRKGGSAV RKSTAPRKSASTDKSTRSIKSKRKPKAW |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| topB | NP_807836.1 | DNA topoisomerase III | Not tested | SPI-7 | Protein | 3e-117 | 42 |
| topB | AAF14809.1 | topoisomerase B | Not tested | SPI-7 | Protein | 2e-117 | 42 |
| topB | NP_458624.1 | topoisomerase B | Not tested | SPI-7 | Protein | 3e-117 | 42 |
| pph56 | CAI36097.1 | Topoisomerase IA | Not tested | PPHGI-1 | Protein | 6e-104 | 41 |
| topB | AAN62317.1 | putative DNA topoisomerase III | Not tested | PAGI-3(SG) | Protein | 1e-107 | 41 |
