Gene Information

Name : TOL_2868 (TOL_2868)
Accession : YP_007683501.1
Strain : Thalassolituus oleivorans MIL-1
Genome accession: NC_020888
Putative virulence/resistance : Virulence
Product : two-component response regulator PilR
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3029108 - 3030469 bp
Length : 1362 bp
Strand : +
Note : -

DNA sequence :
ATGCAAGCTGTACACACAGCACTCATCGTCGATGATGAACCCGATATTCGTCGTTTAATTGCGCTCACACTCGAACGTAT
GGGCCTAGTCTGCTATCAAGCAGAAAACGTAAGCGAAGCGCTAACCTCGCTAGAGGAGCGGCAATATCACTTCTGCATAA
CCGATATGAAACTCCCCGATGGTGATGGTCTGGAGCTTACCCAGCTGTGCAATCGCAAATATCCCGACATGCCCATTGCT
ATGATTACGGCCTACGGCAATATGGATCTCGCCGTCAACGCCCTCAAATCAGGCGCATTCGACTTTGTCGCTAAGCCAAT
TGATACCGAACGTCTGCGTCAACTTGTTAAGGCCGCACTGCAACTAACACGTATTCAGACCATTCGCCCCATATCTTACA
GTGAACTACTGGGCGCGACTCCCTGTATGATTGAGCTAAAAGATAAAATCCGCAAAGTCGCGCGCACCCAAGCACCCGTT
TTTGTCTACGGGGAATCGGGCACGGGAAAAGAACTGGTCGCACAACTCATACACAGCCAAAGCGCACGCGCAGACAAGCC
TTTCATTGCTGTCAATTGCGGAGCTATTCCGGCCGAGTTAATGGAAAGCGAATTTTTTGGTCATATAAAAGGAAGTTTTA
CAGGAGCGCTAAATAATAAAAATGGCTTTTTCAAAGCCGCAAATGGCGGCACCTTATTTCTAGACGAAGTAGCCGAATTG
CCGCTCGATTTGCAAGTAAAACTCCTGCGCGTAGTGCAAGAGAAATCGGTACGTAGCGTTGGCGCCGAAGTCGAAGAGCA
CATTGATGTTCGTATTGTAACCGCGAGCCATGAAGATCTAGCGGCGATGGTAAATGACCATCAATTTCGCCAAGACTTAT
ATTTTCGCCTTAATGTTATTCAACTAGACGTCCCCCGCCTATCCGAGCGTAAAGACGATATTGAAGAATTAACCCACCAC
TTTATTACCAAGTACGCCAACGAGTGGAGCATGCCCAGTACGAAGTTGAGCGAAGAAGCGCTGGCCGCATTGTTGGAATA
TTCGTTTCCCGGCAACGTGCGTGAACTAGAAAACATCTTGCAGCGCGCCTTCACCATGATGGAAGGCGATATTATTCGCT
TAGATGATTTGTATTTTCCCGCAAATATCGCCGCCGAACTGGATTCTGTTACTGACGACACACCTAAAGAGCACGCTCCC
ATTGCGACCAACAACCTTGAAGGTTACCTCGAAAACATTGAAAAACGCGCGATAGAAGAAGCTCTCCTAGCCACTCGCTG
GAATAAAACGGCAGCGGCAGAAAAGCTTGGTATTAGCTTCCGAGCGCTGCGCTATCGTTGTAAGAAATTAGGCATAGATT
AA

Protein sequence :
MQAVHTALIVDDEPDIRRLIALTLERMGLVCYQAENVSEALTSLEERQYHFCITDMKLPDGDGLELTQLCNRKYPDMPIA
MITAYGNMDLAVNALKSGAFDFVAKPIDTERLRQLVKAALQLTRIQTIRPISYSELLGATPCMIELKDKIRKVARTQAPV
FVYGESGTGKELVAQLIHSQSARADKPFIAVNCGAIPAELMESEFFGHIKGSFTGALNNKNGFFKAANGGTLFLDEVAEL
PLDLQVKLLRVVQEKSVRSVGAEVEEHIDVRIVTASHEDLAAMVNDHQFRQDLYFRLNVIQLDVPRLSERKDDIEELTHH
FITKYANEWSMPSTKLSEEALAALLEYSFPGNVRELENILQRAFTMMEGDIIRLDDLYFPANIAAELDSVTDDTPKEHAP
IATNNLEGYLENIEKRAIEEALLATRWNKTAAAEKLGISFRALRYRCKKLGID

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00300 YP_008207765.1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Not tested AbaR25 Protein 2e-100 48
BJAB0868_00304 YP_008211630.1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Not tested AbaR26 Protein 2e-100 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
TOL_2868 YP_007683501.1 two-component response regulator PilR VFG1214 Protein 2e-118 54