Gene Information

Name : TOL_2496 (TOL_2496)
Accession : YP_007683132.1
Strain : Thalassolituus oleivorans MIL-1
Genome accession: NC_020888
Putative virulence/resistance : Virulence
Product : flagellar biosynthetic protein FliP
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2624691 - 2625503 bp
Length : 813 bp
Strand : -
Note : -

DNA sequence :
ATGACGATAAAAAAAGCACTAGGTTGGTTTCTACCGATATTTTTACTGGTTATGCCAACCTTAGGTTGGGCAGCGGATGC
CGCTAGTATGATTGGTGCTACTGGAAGTGGCTCGGCGAGTGGAACGGGGGGCATGCTAGGTATCCCAGCGGTTGTTTATA
AAACTACCGATACTGGCGGGGAATACACGGTTACCATTCAAATTTTAGCCATCATGACCTTGCTGTCGGTGTTGCCATCG
CTACTAATTATGATGACATCATTTACCCGTATTATCGTCGTGATGGCGATATTACGTCAGGCTATGGGGTTGCAGCAAAC
GCCGTCGAATCAAGTCTTACTGGGTTTATCCTTATTTTTGACATTATTTATTATGATGCCTGTGTTTCGCGTGATCAACG
TTGAAGCCGTACAGCCATATATTGCTGAAGAAATAACACCGCAAGTAGCATTAGAACGCGCCATCGTTCCTGTGCACGAA
TTCATGCTGGCTCAGACCCGCGAAACCGATTTGCAGCTGTTTATGCGTATTAGTGGTCGTCAAGATATTGCTACTCCCGA
AGAAACACCGATTCATATCTTGATTCCGGCCTTTATTACCAGTGAACTGAAAACCGCCTTTCAAATTGGTTTTCTAATTT
TTATTCCATTTTTGATCATCGACTTAGTCGTCGCCAGTATTTTGATGGCCATGGGTATGATGATGTTGTCTCCCATTATT
ATTTCGCTACCGTTTAAGATAATGCTGTTCGTTTTAATTGATGGTTGGGCCCTTATTATGGGAACACTCGCGAATAGTTT
TGGTACGGTATAG

Protein sequence :
MTIKKALGWFLPIFLLVMPTLGWAADAASMIGATGSGSASGTGGMLGIPAVVYKTTDTGGEYTVTIQILAIMTLLSVLPS
LLIMMTSFTRIIVVMAILRQAMGLQQTPSNQVLLGLSLFLTLFIMMPVFRVINVEAVQPYIAEEITPQVALERAIVPVHE
FMLAQTRETDLQLFMRISGRQDIATPEETPIHILIPAFITSELKTAFQIGFLIFIPFLIIDLVVASILMAMGMMMLSPII
ISLPFKIMLFVLIDGWALIMGTLANSFGTV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssaR CAA68199.1 secretion system apparatus, SsaR Virulence SPI-2 Protein 3e-21 42
ssaR YP_216427.1 type III secretion system protein Virulence SPI-2 Protein 4e-21 42
ssaR NP_460384.1 type III secretion system protein Virulence SPI-2 Protein 4e-21 42
yscR NP_456109.1 putative type III secretion protein Virulence SPI-2 Protein 4e-21 41
yscR NP_805090.1 type III secretion system protein Virulence SPI-2 Protein 4e-21 41
YPO0270 YP_002345352.1 type III secretion system protein Virulence Not named Protein 1e-22 41
hrcR ABA47279.1 HrcR Virulence S-PAI Protein 5e-17 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
TOL_2496 YP_007683132.1 flagellar biosynthetic protein FliP VFG1259 Protein 1e-58 70
TOL_2496 YP_007683132.1 flagellar biosynthetic protein FliP VFG2016 Protein 7e-51 61
TOL_2496 YP_007683132.1 flagellar biosynthetic protein FliP VFG2494 Protein 5e-45 56
TOL_2496 YP_007683132.1 flagellar biosynthetic protein FliP VFG2338 Protein 3e-44 55
TOL_2496 YP_007683132.1 flagellar biosynthetic protein FliP VFG0519 Protein 2e-21 42
TOL_2496 YP_007683132.1 flagellar biosynthetic protein FliP VFG0188 Protein 2e-20 42
TOL_2496 YP_007683132.1 flagellar biosynthetic protein FliP VFG0044 Protein 1e-21 41