Gene Information

Name : TOL_2266 (TOL_2266)
Accession : YP_007682905.1
Strain : Thalassolituus oleivorans MIL-1
Genome accession: NC_020888
Putative virulence/resistance : Virulence
Product : putative epimerase/dehydratase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2389174 - 2391066 bp
Length : 1893 bp
Strand : +
Note : -

DNA sequence :
ATGATTCGCTATCTACTTGATATGTCTCGCTCAAGAAAGCGTCTAGTTTCCCTTGCCTATGATTTTGTAGCCATACCTTT
GGCGATATACATGGCCATGGCTTTACGCTACGGCACAATGAACTTAAACATAACTGAAAATCTAGTTTACACTGCGGCCA
TTACCGCTTTAGTAACTTCCGCGGCTTTTATAAGACTAGGACTCTATCGCGCTGTAGTGCGGTTCATGACGGAGAGAGCT
TTCACCTCTCTGATGTTAGGCATTGCAATATCGGCATTAACCTTAGCTACGAGTGCATTCTTACTTCAAGCAGCTGTGCC
ACGCTCAAGCATCATTATATATACTTTTACAGCGTATATGTTTTTAGGTGTACCGAGATTATTTGTGCGGGGTATGGTTG
CACAACTAATTAAATCCAATGCCGAGCCGGTTATAATCTACGGAGCAGGTAAACAAGGCATGTCACTAGTTCATGCTCTT
TCTTCAAGCGAATTCTATCGTCCTGTTGCCTTTGTTGACGACTCAAGAAAAAAACAAAAAACATCAATTCAAGGCTTAAA
AGTATGGCCGAGCAAACAACTAGATGACCTCTGTGACACTTACGGTGTAAAAAAAATACTGCTAGCCGTTGGCAAAACTA
ACATGCAGACGAGAAAACATTTAATTGAAGAACTTGCTGAGCGAAAATTAGAGATACTGATCACTCCTTCTTTTGGCGAT
ATTATTAGTGGCCGCGCAAAAATTGAGGAGGTTCGAGAAGTTGATATAGAAGACCTCTTGGGCAGAGACTGCGTTGCACC
AAACAGCACCCTACTGGAAACTAGCGTTAGAGACAAAGTTGTTCTCATTACCGGTGCCGGTGGTTCTATTGGTTCTGAAC
TATGTCGCCAAGTTCTGATGAAAAAACCGACAAAACTGGTTCTATTGGAACTTAACGAATTTAGTCTTTATAGCATTGAA
CAAGAACTACAAGCGACAAATGAAGAACTAAAACTTTCAGTGCCTATAGTTTCAATTTTAGGTTCGGTCCAAAAGCAAAA
TCGCCTAGAAACTATCTTTAAAACATTTAACGTCCAAACCATATATCACGCGGCAGCATACAAACACGTCCCGATGGTCG
AATGCAATGTTGTCGAGGGCGTGAGAAATAATGTATTTGGTTCATGGTATTGCGCTGAAGCAGCCATTACATCGGGTGTG
GAGCGTTTCATCTTAATATCTACTGACAAAGCGGTTCGTCCAACCAACGTAATGGGCGCATCAAAACGTATGGCAGAACT
CGTCCTGCAAGCTCTGTCAACTCGCCAAACAGACACCCTATTTTCCATGGTGCGATTCGGTAATGTACTCGATTCATCAG
GCTCCGTGGTGCCACGATTTCGTAAACAAATAAAAGAAGGGGGGCCTATAACTGTAACCCACCCAGATATTATTCGTTAT
TTTATGACGATTCCCGAAGCGTCACAGCTAGTAATTCAAGCCAGCGCCATGGCTAAAGGCGGCGACGTATTCGTATTAGA
TATGGGCGAACCTGTCAAAATCGTTAGTCTTGCAAAAAAGATGATTCACCTCTCTGGTTTAACAGAGAGGACCGATATAA
ATCCTAACGGTGACATAGAAATTCAATTCACGGGACTTCGTCCTGGAGAAAAATTATTTGAAGAACTGTTAATCAGCGAA
GATGTTGAGGGTACCGAACATCCGCGTATAATGACCGCAAGCGAAGTACATCTTAACTGGCCAGAAACACATAATCTTTT
AAATCGTTTAGATAAAGCTTGTCATAACTTTCAGGTAGACAAAGTAATAAGCCTATTGCAAGAAGCGCCAGCGGCTTACG
ACAAGCAAAATGACTGTACTGACTGGGTATTAAACGAACCAAATAGTCTTTGA

Protein sequence :
MIRYLLDMSRSRKRLVSLAYDFVAIPLAIYMAMALRYGTMNLNITENLVYTAAITALVTSAAFIRLGLYRAVVRFMTERA
FTSLMLGIAISALTLATSAFLLQAAVPRSSIIIYTFTAYMFLGVPRLFVRGMVAQLIKSNAEPVIIYGAGKQGMSLVHAL
SSSEFYRPVAFVDDSRKKQKTSIQGLKVWPSKQLDDLCDTYGVKKILLAVGKTNMQTRKHLIEELAERKLEILITPSFGD
IISGRAKIEEVREVDIEDLLGRDCVAPNSTLLETSVRDKVVLITGAGGSIGSELCRQVLMKKPTKLVLLELNEFSLYSIE
QELQATNEELKLSVPIVSILGSVQKQNRLETIFKTFNVQTIYHAAAYKHVPMVECNVVEGVRNNVFGSWYCAEAAITSGV
ERFILISTDKAVRPTNVMGASKRMAELVLQALSTRQTDTLFSMVRFGNVLDSSGSVVPRFRKQIKEGGPITVTHPDIIRY
FMTIPEASQLVIQASAMAKGGDVFVLDMGEPVKIVSLAKKMIHLSGLTERTDINPNGDIEIQFTGLRPGEKLFEELLISE
DVEGTEHPRIMTASEVHLNWPETHNLLNRLDKACHNFQVDKVISLLQEAPAAYDKQNDCTDWVLNEPNSL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cap1D AAA64643.1 type 1 capsule synthesis gene Virulence SCCcap1 Protein 5e-79 44
SSP0063 YP_300153.1 capsular polysaccharide biosynthesis protein Not tested SCC15305cap Protein 1e-78 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
TOL_2266 YP_007682905.1 putative epimerase/dehydratase VFG0029 Protein 3e-114 47