Gene Information

Name : TOL_1930 (TOL_1930)
Accession : YP_007682582.1
Strain : Thalassolituus oleivorans MIL-1
Genome accession: NC_020888
Putative virulence/resistance : Virulence
Product : two component transcriptional regulator, winged helix family
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2057667 - 2058323 bp
Length : 657 bp
Strand : -
Note : -

DNA sequence : 
GTGCGTATTATGTTGGTAGAAGATGATGCTCCATTAGGTAATGCAGTTAAACTTGCACTGCATGATGCGTCCTATGCGGT
AGATTGGGTTCAAGATGGAGAGTCTGCCTTACGCGCTATAGAGCTTGAAGAATATGCACTTATTTTACTTGATCTTGGTT
TACCTAAAAAAGATGGCCTAGAAGTTTTACGCGAGCTTCGAAAGGACAAAAATAAACTGCCAGTCATCATCATTACTGCA
CGTGATGCAGTAGAGGACCGAATACGAGGTTTAGATTACGGTGCCGATGATTATTTAGTAAAACCATTTTCCATAGACGA
GTTACATGCCCGTATTCGTGCTGTGATCCGTCGCAATCACGGTGTTGCTGATCCAGTTTTAAGCAATAATATAATTACAC
TTAACCCAGTTAACCGCGAAGTGTCTCGAAATGACCAAACTTTTCAGCTCACCGCTAAAGAATATGCTTTGCTGCATGCC
TTGATGCTCAGGCTCGGTGCAATTTTATCTAGAGAAAAACTCGAAGAGAGTATTTATGGTTGGAATGAAGAGGTGGCGAG
CAATGCCATTGAATTTATTATTCATGCTTTGCGTAAAAAACTCGGTAAAGATGTGATAAAAAATGTACGGGGAATGGGCT
GGATGGTGAGTAAATGA

Protein sequence : 
MRIMLVEDDAPLGNAVKLALHDASYAVDWVQDGESALRAIELEEYALILLDLGLPKKDGLEVLRELRKDKNKLPVIIITA
RDAVEDRIRGLDYGADDYLVKPFSIDELHARIRAVIRRNHGVADPVLSNNIITLNPVNREVSRNDQTFQLTAKEYALLHA
LMLRLGAILSREKLEESIYGWNEEVASNAIEFIIHALRKKLGKDVIKNVRGMGWMVSK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 2e-22 43
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 2e-22 42
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 1e-24 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
TOL_1930 YP_007682582.1 two component transcriptional regulator, winged helix family BAC0197 Protein 3e-26 42
TOL_1930 YP_007682582.1 two component transcriptional regulator, winged helix family AE015929.1.gene1106. Protein 2e-19 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
TOL_1930 YP_007682582.1 two component transcriptional regulator, winged helix family VFG0473 Protein 4e-36 48
TOL_1930 YP_007682582.1 two component transcriptional regulator, winged helix family VFG0596 Protein 8e-23 43