Gene Information

Name : TOL_1710 (TOL_1710)
Accession : YP_007682373.1
Strain : Thalassolituus oleivorans MIL-1
Genome accession: NC_020888
Putative virulence/resistance : Virulence
Product : heavy metal response regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1843683 - 1844369 bp
Length : 687 bp
Strand : -
Note : -

DNA sequence :
ATGCGACTTTTAATAGTAGAAGATGAACAAAAGACTGGCGATTACCTGAAACAAGGATTGAGTGAAGCTGGGTTCCTCGT
GTCGCTTGCGAGAACTGGACTCGATGGACATCATTTGGCTATGACTGAAGAATTCGACCTTTTGATTCTTGATGTCATGC
TTCCGGACGTGGATGGTTGGCGAATTCTTCAATCACTACGCGAGTCGGGACAAAAGACACCCGTGCTTTTTCTGTCAGCC
CGAGACAATGTCGACGACCGAGTTAAAGGATTAGAGCTTGGCGCAGATGACTATTTGGTTAAACCCTTTGCATTTGCAGA
AGTGTTGGCCAGAGTTCGTACACTGCTGCGTCGAGGTCAAGCTCCTGCAATAGTGGATCAGCTTCAAATTGGCGATTTAA
TACTGGATATTCCTCGACGACGCGTCACACGACAAGGAAAGAAAGTTAACCTAAGCCACAAAGAGTTTTGCTTGCTGGAA
TTATTGGTTCGCCGACAAGGTGAGGTACTCACGCGCTCACTCATCGCCTCCCAAGTGTGGGATATGAACTTTGATAGTGA
CACTAACGTCATTGATGTCGCCATTCGCCGCTTACGCAAGAAAGTGGACGAAGGTTTTGACGTTAAGCTCATCCATACAA
TAAGAGGAATGGGCTACACCCTAGACTTGGAACGCAATGATGATTAG

Protein sequence :
MRLLIVEDEQKTGDYLKQGLSEAGFLVSLARTGLDGHHLAMTEEFDLLILDVMLPDVDGWRILQSLRESGQKTPVLFLSA
RDNVDDRVKGLELGADDYLVKPFAFAEVLARVRTLLRRGQAPAIVDQLQIGDLILDIPRRRVTRQGKKVNLSHKEFCLLE
LLVRRQGEVLTRSLIASQVWDMNFDSDTNVIDVAIRRLRKKVDEGFDVKLIHTIRGMGYTLDLERNDD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 3e-59 55
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 8e-59 54

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
TOL_1710 YP_007682373.1 heavy metal response regulator BAC0083 Protein 7e-72 68
TOL_1710 YP_007682373.1 heavy metal response regulator BAC0111 Protein 3e-73 65
TOL_1710 YP_007682373.1 heavy metal response regulator BAC0638 Protein 3e-64 65
TOL_1710 YP_007682373.1 heavy metal response regulator BAC0197 Protein 8e-68 64
TOL_1710 YP_007682373.1 heavy metal response regulator BAC0308 Protein 3e-65 63
TOL_1710 YP_007682373.1 heavy metal response regulator BAC0125 Protein 1e-64 60
TOL_1710 YP_007682373.1 heavy metal response regulator BAC0347 Protein 7e-65 59
TOL_1710 YP_007682373.1 heavy metal response regulator BAC0487 Protein 6e-30 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
TOL_1710 YP_007682373.1 heavy metal response regulator VFG0596 Protein 1e-59 55
TOL_1710 YP_007682373.1 heavy metal response regulator VFG1389 Protein 1e-35 43
TOL_1710 YP_007682373.1 heavy metal response regulator VFG1390 Protein 1e-42 42
TOL_1710 YP_007682373.1 heavy metal response regulator VFG1386 Protein 1e-35 41