Gene Information

Name : TOL_0012 (TOL_0012)
Accession : YP_007680701.1
Strain : Thalassolituus oleivorans MIL-1
Genome accession: NC_020888
Putative virulence/resistance : Unknown
Product : transposase orfB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 10804 - 11421 bp
Length : 618 bp
Strand : +
Note : -

DNA sequence :
ATGCAGCAGGCACAAATACAGGCAGAGCGGGGCTACAACCGAAAAACACGCTATGACAGCGGCGAGTTATCCACCGTTGC
CCCTAACCTACTGAATCGTGAATTTGATGTATCCAAACCGAATACCGTATGGGTCACCGATATTACCTACATTCGTACCT
ATGAGGGCTGGCTGTTTCTAGCGGTAATCATTGATTTATTCTCACGGCAGGTCGTTGGCTGGTCGATGAGTGAACGTATT
AATACCGATTTGGTACTGAATGCAATCACGATGGCGTGCTGGCGAAGGAAGCCAAAAGGTGAGGTGATCGTGCATTCCGA
TCAAGGTTGCCAATACACAAGTTACGACTGGCAAAGCATGTTAAAAGCCAATAACTTAACCGTCAGTATGAGCCGTAGAG
GGAACTGTCATGATAATGCCTGTGCGGAAAGCTTCTTTGCCTTGCTAAAGCGAGAACGTATTCGCCGTAAAATTTATCGC
ACAAGAGAAGAAGGAAAAGCGGATATATTTAATTATATTGAGCTGTTTTATAATTCCACACGTCGTCATGGTAATAATAA
TGACTTGTCGCCAAGGGACTATGAAAAGAATTATTTCTTGAAGCAAATGGGTGTCTAG

Protein sequence :
MQQAQIQAERGYNRKTRYDSGELSTVAPNLLNREFDVSKPNTVWVTDITYIRTYEGWLFLAVIIDLFSRQVVGWSMSERI
NTDLVLNAITMACWRRKPKGEVIVHSDQGCQYTSYDWQSMLKANNLTVSMSRRGNCHDNACAESFFALLKRERIRRKIYR
TREEGKADIFNYIELFYNSTRRHGNNNDLSPRDYEKNYFLKQMGV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnpB CAB61574.1 transposase B Not tested HPI Protein 4e-31 48
trp1329B CAB46576.1 IS1329 transposase B Not tested HPI Protein 2e-31 48
ECs4537 NP_312564.1 hypothetical protein Not tested LEE Protein 2e-25 44
unnamed AAC31485.1 L0006 Not tested LEE Protein 1e-25 44
Z5089 NP_290241.1 transposase Not tested LEE Protein 2e-25 44
unnamed ACU09432.1 IS911 transposase orfB Not tested LEE Protein 1e-25 44
CDC7B_2039 YP_005163480.1 transposase-like protein Not tested Not named Protein 2e-14 43
CDCE8392_1961 YP_005134492.1 transposase-like protein Not tested Not named Protein 2e-14 43
aec65 AAW51748.1 Aec65 Not tested AGI-3 Protein 4e-26 42
unnamed CAI43898.1 putative transposase Not tested LEE Protein 4e-26 42
ECO111_3779 YP_003236114.1 putative IS602 transposase OrfB Not tested LEE Protein 6e-26 42
l7094 CAD33743.1 ORF B protein Not tested PAI I 536 Protein 1e-25 41
orfB CAE85178.1 OrfB protein, IS911 Not tested PAI V 536 Protein 1e-25 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
TOL_0012 YP_007680701.1 transposase orfB VFG0785 Protein 6e-26 44
TOL_0012 YP_007680701.1 transposase orfB VFG1484 Protein 6e-26 41