Gene Information

Name : Clst_0836 (Clst_0836)
Accession : YP_007678929.1
Strain : Clostridium stercorarium DSM 8532
Genome accession: NC_020887
Putative virulence/resistance : Resistance
Product : ABC transporter ATPase subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 920069 - 920803 bp
Length : 735 bp
Strand : +
Note : antimicrobial peptide transport system; COG:1136 ABC-type antimicrobial peptide transport system ATPase component; KEGG_module M00258:Putative ABC transport system; KO:K02003 putative ABC transport system ATP-binding protein

DNA sequence :
ATGGAAAACGTAATTGTAATCAAAGATCTTAAAAAAGTCTACCGTATGGGACAGGAGAAGGTATATGCCCTTAATGGTAT
AGATCTTGAAGTGAAAAAGGGTGAAATATGTTGCCTTTTCGGTACTTCAGGATCGGGAAAGACAACCCTTCTCAATATGG
TGGCGGGTTTGGAAAAGCCCACTAAAGGGAGTGTCATAGTCAAGGGGATTCATGTGGAAAAGCTGAATGAGAAGCAGCTT
GCGAAATTCAGGCAGCAATATATAGGTTTTATATTCCAGTCATATAACCTTCTGCCGAATATGACCGCCCTTGAAAATGT
TACACTGCCGCTGATATTTAAGGGATACCCTAAAAAGCTCAGAACCAGGGAAGCATTGAAAATGCTGAAAGCTGTTGGGC
TTGAACACAGGGTTAACCACAAGCCAAACCAGATGAGCGGTGGTCAGCAGCAGCGCGTAAGTATAGCCCGCGCTTTTGTG
GAAAAGCCGGAGATTATACTTGCGGACGAACCTACCGGAAATCTGGATTCAAAAACCACAATTGAAATAATGAATTTGAT
ATCCGAAATGGCTGAAAAATACGGGCAGACGATACTTATTGTCTCCCACGATACCGAAGCCGCCGCATATGCAGACAGGA
TTGTCCATATGAGGGATGGCATGATTGAGAAGATTGAAGTGAAGGATAAGTATTACAAAAAATTTGGTTTGAAGGAGTGT
GCTTCAAATGCATAG

Protein sequence :
MENVIVIKDLKKVYRMGQEKVYALNGIDLEVKKGEICCLFGTSGSGKTTLLNMVAGLEKPTKGSVIVKGIHVEKLNEKQL
AKFRQQYIGFIFQSYNLLPNMTALENVTLPLIFKGYPKKLRTREALKMLKAVGLEHRVNHKPNQMSGGQQQRVSIARAFV
EKPEIILADEPTGNLDSKTTIEIMNLISEMAEKYGQTILIVSHDTEAAAYADRIVHMRDGMIEKIEVKDKYYKKFGLKEC
ASNA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-32 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 4e-32 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-32 41
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-29 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Clst_0836 YP_007678929.1 ABC transporter ATPase subunit NC_012469.1.7686878. Protein 4e-46 48
Clst_0836 YP_007678929.1 ABC transporter ATPase subunit CP001581.1.gene598.p Protein 1e-45 47
Clst_0836 YP_007678929.1 ABC transporter ATPase subunit CP001581.1.gene798.p Protein 2e-41 42