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Name : fliQ (Clst_0554) Accession : YP_007678669.1 Strain : Clostridium stercorarium DSM 8532 Genome accession: NC_020887 Putative virulence/resistance : Virulence Product : FliQ Function : - COG functional category : - COG ID : - EC number : - Position : 607753 - 608022 bp Length : 270 bp Strand : + Note : flagellar biosynthetic protein; COG:1987 Flagellar biosynthesis pathway component FliQ; KO:K02420 flagellar biosynthetic protein FliQ; contains signal peptide; contains transmembrane domain DNA sequence : ATGGAACAGCTGGTTTTGGACCTTGCAAGGGATGCGGTGCTGGTTATAATCAAATTGTGTGCACCCCTTTTAGGAGTGGC TTTAATAGTTGGTTTGGCAATAAGCATATTCCAGGCTACAACTCAAATTCAGGAACAGACTCTTTCCTTTGTTCCTAAAA TTCTGGCCGTTTTCCTTTCCCTGTTTATATTTGGTTCATGGCTTATGACCACTTTAAAGGAATTTACGTTAAGGATCTAT GAGAATATATTAAGATTTATATACTATTAG Protein sequence : MEQLVLDLARDAVLVIIKLCAPLLGVALIVGLAISIFQATTQIQEQTLSFVPKILAVFLSLFIFGSWLMTTLKEFTLRIY ENILRFIYY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| escS | CAC81848.1 | EscS protein | Virulence | LEE II | Protein | 6e-05 | 44 |
| escS | AAK26701.1 | EscS | Virulence | LEE | Protein | 6e-05 | 44 |
| escS | YP_003223489.1 | T3SS structure protein EscS | Virulence | LEE | Protein | 9e-05 | 44 |
| escS | AAL57528.1 | EscS | Virulence | LEE | Protein | 6e-05 | 44 |
| escS | YP_003232139.1 | T3SS structure protein EscS | Virulence | LEE | Protein | 9e-05 | 44 |
| lscS | AAO18039.1 | LscS | Virulence | TTSS locus | Protein | 7e-05 | 44 |
| hrcS | NP_791221.1 | type III secretion protein HrcS | Virulence | Hrp PAI | Protein | 3e-06 | 42 |
| hrcS | AAT96147.1 | HrcS | Virulence | T-PAI | Protein | 6e-06 | 42 |
| hrcS | AAT96201.1 | HrcS | Virulence | T-PAI | Protein | 6e-06 | 42 |
| hrcS | AAG33885.1 | HrcS | Virulence | Hrp PAI | Protein | 2e-06 | 42 |
| unnamed | AAL06355.1 | EscS | Virulence | LEE | Protein | 5e-05 | 42 |
| escS | CAI43888.1 | EscS protein | Virulence | LEE | Protein | 1e-04 | 42 |
| escS | AAC38370.1 | EscS | Virulence | LEE | Protein | 7e-05 | 42 |
| escS | AAC31527.1 | L0048 | Virulence | LEE | Protein | 7e-05 | 42 |
| escS | YP_003236102.1 | T3SS structure protein EscS | Virulence | LEE | Protein | 1e-04 | 42 |
| escS | ACU09472.1 | hypothetical protein | Not tested | LEE | Protein | 7e-05 | 42 |
| escS | NP_290282.1 | hypothetical protein | Virulence | LEE | Protein | 1e-04 | 42 |
| ECs4582 | NP_312609.1 | EscS | Virulence | LEE | Protein | 1e-04 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| fliQ | YP_007678669.1 | FliQ | VFG2454 | Protein | 6e-07 | 46 |
| fliQ | YP_007678669.1 | FliQ | VFG0826 | Protein | 3e-05 | 42 |
| fliQ | YP_007678669.1 | FliQ | VFG0716 | Protein | 3e-05 | 42 |
| fliQ | YP_007678669.1 | FliQ | VFG2132 | Protein | 3e-07 | 42 |
