Gene Information

Name : Clst_2653 (Clst_2653)
Accession : YP_007680680.1
Strain : Clostridium stercorarium DSM 8532
Genome accession: NC_020887
Putative virulence/resistance : Resistance
Product : ABC transporter ATPase subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2952944 - 2953696 bp
Length : 753 bp
Strand : -
Note : antimicrobial peptide transport system; COG:1136 ABC-type antimicrobial peptide transport system ATPase component; KEGG_module M00258:Putative ABC transport system; KO:K02003 putative ABC transport system ATP-binding protein

DNA sequence :
ATGGGTGATGACTTTATGATACATATAGAAAACCTGTATAAGGTATACAGGAATGGTTCAATATCGGTTGAAGCATTAAA
AGGCATAAATCTTCATGTGGATGAAGGCGAGTTTGTGGCCATAATGGGGCCTTCGGGGTCGGGAAAGTCAACACTGATGA
ATATTATCGGTTGTCTTGATAGAATGACATCAGGGATGTATACTTTGAATAATATTGATATATCAAAGCTGTCTGCTTAT
GAGCTTGCGAAAATAAGAAACCACCAAATAGGATTTGTTTTTCAGACATTTAATCTTTTGCCGAGAATGACTGCACTGAA
AAATGTGGAGCTTCCGATGATTTATGCAGGAGTACCGGCTAAAAAACGCCGTGAAAGGGCAATTGAAGCCTTGGCGAAGG
TTGACCTGCTTGAAAGAATGAACCATCGGCCGAATGAACTTTCGGGGGGTCAGCGTCAAAGGGTTGCAATAGCCCGTGCC
CTCGTAAACAATCCAAGTATCATCCTTGCGGATGAACCTACCGGTAACCTTGACAGCAAATCTGGTGAGGAAATCATGAG
TGTTTTCCAGAAGCTCAACCGCGAAGGCGTTACAATAGTATTGGTTACCCATGAACCCGATATAGCGCAGCATACTAAAA
GAGTCGTGACTTTCAGAGACGGAAAAATTATAAGCGACGAACCGGTGAAAAACCCTGTGGATGCCGAAAGTGTCCTGAAA
ACAATGGTGGAAAAGAACATTATATATCAGTGA

Protein sequence :
MGDDFMIHIENLYKVYRNGSISVEALKGINLHVDEGEFVAIMGPSGSGKSTLMNIIGCLDRMTSGMYTLNNIDISKLSAY
ELAKIRNHQIGFVFQTFNLLPRMTALKNVELPMIYAGVPAKKRRERAIEALAKVDLLERMNHRPNELSGGQRQRVAIARA
LVNNPSIILADEPTGNLDSKSGEEIMSVFQKLNREGVTIVLVTHEPDIAQHTKRVVTFRDGKIISDEPVKNPVDAESVLK
TMVEKNIIYQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-30 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-31 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-31 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-31 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Clst_2653 YP_007680680.1 ABC transporter ATPase subunit NC_012469.1.7686878. Protein 5e-64 62
Clst_2653 YP_007680680.1 ABC transporter ATPase subunit NC_008702.1.4606598. Protein 8e-47 47
Clst_2653 YP_007680680.1 ABC transporter ATPase subunit CP001581.1.gene798.p Protein 1e-36 45
Clst_2653 YP_007680680.1 ABC transporter ATPase subunit CP001581.1.gene598.p Protein 2e-37 41