Gene Information

Name : Clst_2446 (Clst_2446)
Accession : YP_007680479.1
Strain : Clostridium stercorarium DSM 8532
Genome accession: NC_020887
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2749671 - 2750741 bp
Length : 1071 bp
Strand : -
Note : IS30 family or inactivated derivative; COG:2826 Transposase and inactivated derivatives IS30 family

DNA sequence :
ATGGCTGTACAATATAAGTCTACCACAACTGAGCATAAGTTTAAACACTTAAGTGTTTATGAAAGAGGGCAGATTGCAGC
TCTTTTAAAAGAAGGAAAGAGTCAACGTTATATTGCTAATAAACTAGGTCGCTCGCCAAGTACAATTAGCCGTGAAATTA
AAAGAGGGACAACAATGCAGATGAGAACTGATTTATCGACATACAAAGTATATTTTCCTGAAACAGGGCAGGCAGTTTAT
GAGAAAAATCGTATGAATTGCGGAGCAAAGCGTAAATTGGCTCAAGTTGAAGATTTTCTTAAGTTTGCAGAAGATAAGAT
ACTACGCGAAAAATGGTCTCCAGATGCAGTTGTTGGTTTATGTAGGAGAGACCCCAAGTGGCAAAATTCTACTATTGTAT
GTACCAAAACACTGTATAATTATATAGACCTGGGACTCATAAAAGTACGAAATATAGATTTAAATCTTAAACTACGTTTA
AAATCTAAAATAAAAAGGATACGTCAAAACAAACGGGTTGTAGGGAAAAGCATTGATCAAAGGCCGGAAGAAGTACAATC
ACGTCAAACCTTTGGGCATTGGGAAATTGATACGGTAACAGGCAAAAAGTCTAACGATTCAGTAATTTTAACCTTAACTG
AACGAAAAACCCGCTACGAGTTATTGTTTCTTTTGGACGCAAAAGACAGTAATACTGTTAACGAGGCACTTTCAGAACTT
AAGAATTGTTATGGTAAGGATGTTTCAAATGTATTTCGCACTATAACGGCAGACAATGGTTCTGAATTTAGTAGACTATC
CGAAATGTTACAAGGGCTAGGAATTGAAGCTTATTTCACTCATCCTTATTCCTCATGGGAGAGAGGAACTAATGAACGTC
ATAATGGACTTATTAGGCGTTTTATTCCTAAAGGAAAGGCTATAAAAGATTTTTCTGAAGAAACGATAAAACGGATACAA
CAATGGTTAAACAGCCTTCCACGAAGGATATTAGGTTACAAAACACCTGAAGAATGTTTTAATGAAGAGATACATAACCT
GGTAAACAAAAATATATCAGCAATAGTCTGA

Protein sequence :
MAVQYKSTTTEHKFKHLSVYERGQIAALLKEGKSQRYIANKLGRSPSTISREIKRGTTMQMRTDLSTYKVYFPETGQAVY
EKNRMNCGAKRKLAQVEDFLKFAEDKILREKWSPDAVVGLCRRDPKWQNSTIVCTKTLYNYIDLGLIKVRNIDLNLKLRL
KSKIKRIRQNKRVVGKSIDQRPEEVQSRQTFGHWEIDTVTGKKSNDSVILTLTERKTRYELLFLLDAKDSNTVNEALSEL
KNCYGKDVSNVFRTITADNGSEFSRLSEMLQGLGIEAYFTHPYSSWERGTNERHNGLIRRFIPKGKAIKDFSEETIKRIQ
QWLNSLPRRILGYKTPEECFNEEIHNLVNKNISAIV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CPR_0321 YP_697650.1 IS1470, transposase Not tested Not named Protein 9e-70 49
CPR_0383 YP_697712.1 IS1470, transposase Not tested Not named Protein 3e-70 49
CPR_1078 YP_698400.1 IS1470, transposase Not tested Not named Protein 3e-70 49
CPR_0628 YP_697955.1 IS1470, transposase Not tested Not named Protein 3e-70 49
CPR_0314 YP_697643.1 IS1470, transposase Not tested Not named Protein 2e-70 49
CPR_0967 YP_698290.1 IS1470, transposase Not tested Not named Protein 2e-70 49
CPR_1088 YP_698410.1 IS1470, transposase Not tested Not named Protein 4e-69 49
CPR_0379 YP_697708.1 IS1470, transposase Not tested Not named Protein 2e-70 49
CPR_0648 YP_697974.1 IS1470, transposase Not tested Not named Protein 2e-69 49
CPR_0659 YP_697986.1 IS1470, transposase Not tested Not named Protein 2e-45 46