Gene Information

Name : Clst_2312 (Clst_2312)
Accession : YP_007680353.1
Strain : Clostridium stercorarium DSM 8532
Genome accession: NC_020887
Putative virulence/resistance : Virulence
Product : lysyl-tRNA synthetase
Function : -
COG functional category : -
COG ID : -
EC number : 6.1.1.6
Position : 2606808 - 2608310 bp
Length : 1503 bp
Strand : -
Note : class 2; COG:1190 Lysyl-tRNA synthetase; KEGG_module M00360:Aminoacyl-tRNA biosynthesis; KEGG_module M00359:Aminoacyl-tRNA biosynthesis; KO:K04567 lysyl-tRNA synthetase class II; ITERM:07335 lysyl-tRNA synthetase class II

DNA sequence :
ATGTCAGAAAATATTAATCATAGCCAAAATACCGAAGAAGTTCAGAATTTAAATGAAATACTGAAGGTGAGAAGACAGAA
GCTCGGCGATCTGCAAAGCAAGGGAAAGGACCCGTTTAAAATAGTAAAATACGATGTAACTCAAAAAACAAAAGAAATAA
CCGATAATTTTGACGAATTTGAAGGAAAAGAAGTTTCCATAGCCGGAAGACTGATGGCAAAACGGGGAATGGGGAAGACC
AGTTTCTGCGATATTCAGGACAGGGACGGAAAAATTCAGCTTTTCGTACGCATAAACGAGCTCGGGGAAGAAGCGTATGA
AGAGTTCAAGAAACTGGACATAGGCGATATCATAGGTGTCAGAGGAACGGTTTTTAAAACCAAGATGGGTGAAATAAGCA
TACGGGTTCATGAATATACGCTGTTGGCAAAGTCTTTAAGACCGTTGCCAGAAAAGTTTCATGGTCTGAAAGATACCGAT
ACCCGTTATCGTCAGAGATATCTTGATCTTATTGTGAATCCCGAAGTAAAGAAAACATTTATTATGCGCAGCAGGATTAT
CTCTGCAATAAGGAGCTTTTTGGACAGCAGGGGATTTCTTGAAGTTGAAACCCCAATTCTGAACCTGATTCCCGGAGGGG
CTAATGCAAGGCCGTTTATAACTCATCATAACACACTGGATCTGGATATGTATTTAAGAATCGCGCCCGAATTATATTTA
AAAAGGCTTATAGTCGGCGGAATGGAAAAGGTATACGAGTTAGGGCGGATGTTCAGGAATGAAGGCATGTCAGTAAAGCA
TAACCCGGAATTCACGTTACTGGAAGTGTATGAAGCATATACTGACTATCACGGAATGATGAAATTAACCGAAGATTTGT
ATCTGCATGTCGCCGACACGGTACTGGGAACGAGAAAGTTTGAGTATCAGGGGTATGAGATTGATTTATCATTGCCATGG
GCGCGCATGACAATGACAGAAGCTGTAAAGAAATACACCGGAATTGACTTTGACACGATTGCGTCAGATGACGAAGCTGT
TGCGCTGGCAAAGGAAAAAGGGCTTGATGTGACGGGTAAGACAAAAAAAGGGGAAATACTTAACCTGTTTTTTGAAGAAT
TTGTGGAAGAGCATCTTATCCAACCCACATTTATAATGGATTATCCTGTTGAAGTATCGCCGCTGACGAAGAGAAAACCC
GACAAGCCTGAACTTACCGAAAGGTTTGAACTGTTTATTGTGGGACGGGAAATGGCAAATGCCTATTCTGAATTAAATGA
TCCCATTGATCAGAAGGAAAGATTTCTGGCTCAGTTGAGAAAACGGGAACAGGGCGATGAGGAAGCAAATATGATGGATG
AAGACTTTATAATTGCGCTGGAGCACGGCATGCCGCCCACAGGTGGTCTTGGCGTGGGCATTGACAGGCTTGTAATGTTG
TTCACAAATTCATATTCCATACGCGATGTGCTGCTGTTCCCGACTATGAAGCCAAGAGAATAA

Protein sequence :
MSENINHSQNTEEVQNLNEILKVRRQKLGDLQSKGKDPFKIVKYDVTQKTKEITDNFDEFEGKEVSIAGRLMAKRGMGKT
SFCDIQDRDGKIQLFVRINELGEEAYEEFKKLDIGDIIGVRGTVFKTKMGEISIRVHEYTLLAKSLRPLPEKFHGLKDTD
TRYRQRYLDLIVNPEVKKTFIMRSRIISAIRSFLDSRGFLEVETPILNLIPGGANARPFITHHNTLDLDMYLRIAPELYL
KRLIVGGMEKVYELGRMFRNEGMSVKHNPEFTLLEVYEAYTDYHGMMKLTEDLYLHVADTVLGTRKFEYQGYEIDLSLPW
ARMTMTEAVKKYTGIDFDTIASDDEAVALAKEKGLDVTGKTKKGEILNLFFEEFVEEHLIQPTFIMDYPVEVSPLTKRKP
DKPELTERFELFIVGREMANAYSELNDPIDQKERFLAQLRKREQGDEEANMMDEDFIIALEHGMPPTGGLGVGIDRLVML
FTNSYSIRDVLLFPTMKPRE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD66193.1 putative lysil-tRNA synthetase LysU Not tested PAI III 536 Protein 2e-115 49
lysS YP_005163386.1 lysyl-tRNA synthetase Not tested Not named Protein 7e-88 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Clst_2312 YP_007680353.1 lysyl-tRNA synthetase VFG1668 Protein 1e-115 49