Gene Information

Name : Clst_2306 (Clst_2306)
Accession : YP_007680347.1
Strain : Clostridium stercorarium DSM 8532
Genome accession: NC_020887
Putative virulence/resistance : Virulence
Product : ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2601416 - 2603713 bp
Length : 2298 bp
Strand : -
Note : ATP-binding subunit; COG:0542 ATPases with chaperone activity ATP-binding subunit; KO:K03697 ATP-dependent Clp protease ATP-binding subunit ClpE

DNA sequence :
ATGATTAAGTGTTCAATATGCAAGAAAAATATTGCAGTGATTTTTATAACCAAGGTAGTTAACGGAAAACAGGAACCGAT
AGGTTTATGCATGCAGTGCGCACAAAAACAGGGGATTGCCCCGCTAAATCATATACTCCAGCAGACTGGGTTGACGCCAC
AGGATTTTGAGAATTTAAGCAATCAGATGATGAGTTTGTTTGAGAATATGGATATGGAAGGCTTTGAAGACGCTTTTTCC
GATAATGAAGAGGGAAGAAGCAACCAGTTGCTGCGGCCATTTGGCAATATGGTATCCGATGACAGAGCTTCCGATGATGA
CAAAAAAAACGGAGGTTACGACAATGTCAGGATTAAGACCAAAAAAGGAAGACGTAAATATCTTGACATGTATGGGATAA
ATTTGACCGAGAAGGCCGCAAAAGGTGAAATTGACAGGATTATCGGCCGCGAGTGCGAGATAGATCGCGTTATCCAGATT
CTCAACAGGCGTACCAAGAACAATCCCGTGCTTATCGGTGAGCCCGGTGTAGGTAAAACCGCGATTGCCGAGGGGCTGGC
GGTGCGGATTGTTAACAAGCAGGTACCGGCAAGGTTCTTTTCCACTGAGATTTATTTGCTGGATCTGGCCGCAGTTGTGG
CAGGAACACAGTTCAGGGGCCAGTTTGAGGCAAGGATGAAATCCATATTGAAGGAGGCAAAGGAAAACGGAAACATTATC
CTTGTAATAGACGAATTGCACAATATAATAGGTGCGGGAGATGCCGAAGGCGGAGCAATGAATGCGGCCAATATTCTGAA
ACCCGCCCTTGCCCGTGGGGAAGTGCAGGTAATAGGTGCAACCACACTGGATGAATACAGAAAATACATTGAAAAGGATG
CGGCACTGGAAAGACGGTTCCAGCCCGTTATGGTAGATGAGCCTACCGTTGCGGAGACAATAGAAATTCTTAAGGGTATT
AAGGGATACTATGAGGAATACCACCATGTCAGAATACCCGATGATGTTATTGAATACGCGGTAATGCTGTCGGACAGATA
TATCCATGACAGATTTCTGCCCGACAAGGCGATTGACGTGATTGACGAGGCAGGCTCAAGGGTAAATCTGATGAATCAGG
GACTTGTGGAACTGGAGGCTTTAAAGCAGGAGCTGCAGAGAGTCCAGGAAGCCAAGGAACAGGCGGCGCTGCATGATGAT
TACAAGAAAGCGGCCGACTATAAAGTGGAGGAATGCAGGCTGCAGGAAAAAATCAATGAACTTACCGCGAAATACGGGAC
GATGGATGTCACAAAGGACGATGTTGCTTATGTTATTGAGTCATGGACAAAGATACCGGTAAGCAGAATAACGGAAGCCG
AAGCCCAGAAACTGATCTCGCTGGAGGAACGCCTTCACAGAAGGGTTGTAGGACAGAACAGGGCTGTTGAAAGTGTGGCT
AAAGCCATAAGAAGGAACAGATCTGATTTCAGAAGGAAGCGTAAGCCCAGTTCGTTCATTTTCGTCGGGCCCACCGGTGT
CGGAAAAACTGAGCTTGCCCGTGCTGTCGCCGAGGAACTGTTTGGCAGCGAGGATGCAATGATACGTCTTGATATGTCGG
AATATATGGAAAAACATACAGTTTCGAAATTGATAGGCGCACCTCCGGGATACGTAGGATTTGATCAGGGAGGGCAGTTA
ACCGAGAAAGTACGCAGAAAGCCTTATTCGGTTATCCTGCTGGACGAGATTGAAAAAGCCCATCCCGATGTGTTCAATAT
CCTGCTGCAGATTATGGAAGACGGAAGGCTTACCGACAGTCAGGGAAGAACGGTCAGCTTTGAAAACACAATCATTATCA
TGACGTCTAATGCCGGAACCAGTAACAGGGCCTACAGCATAGGTTATAATAATGAGAACGTCGTTAACATGGAAAAGCAG
ATTATGGATGCGGTAAAAAGCACTTTCAGGCCCGAATTCCTGAACAGGGTGGATGAAATTATTGTATTTGAGGAATTGAC
GAAAGAGCAGCTCAATGCCATTGTCAACATGATGATAGAAGAAGTGCGGAGAAACGCTGCGGAAAAAGGTATAGACATTG
TGGTCAGTCAGAAGGCAAAGGACGCCCTGGTGGAAAAGGGCTACAGCCCGAAATACGGAGCAAGGCCGCTCAGGAAGAAG
ATTCAGCAGTATATAGAAGACGAGCTTGCCGAAAAGTATTTAAAGGGCGAAATTTCAAACGGTTCTGTTGTTTCGGTTGA
CTATGACGGGAACAAATTCACCTTTGAAATACGGAATTTAACACCTGCAAACAATTGA

Protein sequence :
MIKCSICKKNIAVIFITKVVNGKQEPIGLCMQCAQKQGIAPLNHILQQTGLTPQDFENLSNQMMSLFENMDMEGFEDAFS
DNEEGRSNQLLRPFGNMVSDDRASDDDKKNGGYDNVRIKTKKGRRKYLDMYGINLTEKAAKGEIDRIIGRECEIDRVIQI
LNRRTKNNPVLIGEPGVGKTAIAEGLAVRIVNKQVPARFFSTEIYLLDLAAVVAGTQFRGQFEARMKSILKEAKENGNII
LVIDELHNIIGAGDAEGGAMNAANILKPALARGEVQVIGATTLDEYRKYIEKDAALERRFQPVMVDEPTVAETIEILKGI
KGYYEEYHHVRIPDDVIEYAVMLSDRYIHDRFLPDKAIDVIDEAGSRVNLMNQGLVELEALKQELQRVQEAKEQAALHDD
YKKAADYKVEECRLQEKINELTAKYGTMDVTKDDVAYVIESWTKIPVSRITEAEAQKLISLEERLHRRVVGQNRAVESVA
KAIRRNRSDFRRKRKPSSFIFVGPTGVGKTELARAVAEELFGSEDAMIRLDMSEYMEKHTVSKLIGAPPGYVGFDQGGQL
TEKVRRKPYSVILLDEIEKAHPDVFNILLQIMEDGRLTDSQGRTVSFENTIIIMTSNAGTSNRAYSIGYNNENVVNMEKQ
IMDAVKSTFRPEFLNRVDEIIVFEELTKEQLNAIVNMMIEEVRRNAAEKGIDIVVSQKAKDALVEKGYSPKYGARPLRKK
IQQYIEDELAEKYLKGEISNGSVVSVDYDGNKFTFEIRNLTPANN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 2e-157 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Clst_2306 YP_007680347.1 ATPase VFG0079 Protein 5e-163 53
Clst_2306 YP_007680347.1 ATPase VFG0080 Protein 3e-160 48