Gene Information

Name : Clst_1541 (Clst_1541)
Accession : YP_007679614.1
Strain : Clostridium stercorarium DSM 8532
Genome accession: NC_020887
Putative virulence/resistance : Virulence
Product : lipoprotein signal peptidase
Function : -
COG functional category : -
COG ID : -
EC number : 3.4.23.36
Position : 1721939 - 1722442 bp
Length : 504 bp
Strand : -
Note : COG:0597 Lipoprotein signal peptidase; KO:K03101 signal peptidase II; contains signal peptide; contains transmembrane domain

DNA sequence : 
ATGTTCTGGACGATTTTAATAGCCGTGTTGTTTGCATTGGATCAGGTAACAAAGGCGTACGTGAGGGATAATCTCCCCTT
GGGGGTAAGAAACGAAGTGATCCCCGGCTTTTTTTATTTTACCCATGTGGAAAATACCGGCGCTGCCTTCGGCATACTCA
AAAACGGCAGGTACTTTTTTATAATACTGACTGTTATAATCTGTGGCATACTGATTTATGTGATGATAAAGAATAAACAG
AAATTGCTAAGACTTGCGATTTCCTTTATTCTGGCAGGCGCAGCCGGAAACTGGATTGATCGTGTTATCCGCGGAAAAGT
AACCGATTTTTTTGATTTTTATATTTTCGGATATGATTATCCTGTCTTTAATGTTGCTGATATTTGCATAAACATTGGTA
CGTTTCTTCTTGTGTTTTTTGTGCTTTTCATCTATAAGGAACCAAAAAAAGAAAATGCGGCAGCAGAAGACTTAATGGCT
GGTGCAGGTGAGGATGACGAATGA

Protein sequence : 
MFWTILIAVLFALDQVTKAYVRDNLPLGVRNEVIPGFFYFTHVENTGAAFGILKNGRYFFIILTVIICGILIYVMIKNKQ
KLLRLAISFILAGAAGNWIDRVIRGKVTDFFDFYIFGYDYPVFNVADICINIGTFLLVFFVLFIYKEPKKENAAAEDLMA
GAGEDDE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lspA ADI24143.1 lipoprotein signal peptidase Not tested AbaR1 Protein 5e-05 45
lspA CAJ77023.1 lipoprotein signal peptidase Not tested AbaR1 Protein 4e-05 45
lspA ACS32043.1 lipoprotein signal peptidase Not tested AbaR5 Protein 6e-05 45
ACICU_00236 YP_001844895.1 lipoprotein signal peptidase Not tested AbaR20 Protein 1e-06 41
lspA ACN81031.1 lipoprotein signal peptidase Not tested AbaR5 Protein 1e-06 41
lspA CAJ77096.1 Lipoprotein signal poeptidase Not tested AbaR1 Protein 1e-06 41
lspA ADZ05771.1 lipoprotein signal peptidase Not tested AbaR11 Protein 1e-06 41
lspA AGK36655.1 lipoprotein signal peptidase Not tested AbaR26 Protein 1e-06 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Clst_1541 YP_007679614.1 lipoprotein signal peptidase VFG2161 Protein 2e-11 41