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Name : Clst_1392 (Clst_1392) Accession : YP_007679470.1 Strain : Clostridium stercorarium DSM 8532 Genome accession: NC_020887 Putative virulence/resistance : Virulence Product : response regulator Function : - COG functional category : - COG ID : - EC number : - Position : 1561927 - 1562643 bp Length : 717 bp Strand : - Note : consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; COG:0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain DNA sequence : ATGAATGATATTAAATTCCAGGGTGAAAAAATGGCTGAGAAAATACTGATAATCGAAGATGATACAAGGCTGGCCAGGTT TCTTGAGCTGGAACTCAGGCACGAGGGGTACGAAGTTGAAATAGCCTACGACGGGCGAAGCGGTCTTGAAAAAGCCTTGA GTAATAATCCCGACCTGGTAATTCTTGATCTGATGCTTCCTCTTCTAAGCGGGATTGAGGTTTTACGGCGTATCAGGAAA GTGTCGGACATGCCCGTTATCATGCTAACTGCAAAGGATGACGTATCTGATAAGGTGGTAGGTCTTGACAGCGGGGCGGA TGATTATGTCACAAAACCATTTGCGATAGAAGAACTGCTGGCGAGAATAAGGGTTGCCCTTAAAAGGCGAGACAACTCCG CCAAAAGGGAAAGTGACATTATCAGGGCCGGGGATCTTGTTCTGAATAAGGCAAAGCACACTGTAATGTATAAAGATGAA GAAATAACGCTTTCCAAAAAGGAATATGATCTTCTTGAATACCTTATGGAAAACAGGGGTATTGTCCTAACACGCGAGCA GATTCTGGAAAAGGTATGGGGTTATGATTATTTTGGAGATACCAATGTAACCGACGTATACATAAGATATCTCAGAGCAA AAATTGATCAGAAATACAACCTTTCTTACATAAAAACGGTGCGTGGAGTGGGGTATATTTTTGAAGACGGAGAATAG Protein sequence : MNDIKFQGEKMAEKILIIEDDTRLARFLELELRHEGYEVEIAYDGRSGLEKALSNNPDLVILDLMLPLLSGIEVLRRIRK VSDMPVIMLTAKDDVSDKVVGLDSGADDYVTKPFAIEELLARIRVALKRRDNSAKRESDIIRAGDLVLNKAKHTVMYKDE EITLSKKEYDLLEYLMENRGIVLTREQILEKVWGYDYFGDTNVTDVYIRYLRAKIDQKYNLSYIKTVRGVGYIFEDGE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| copR | NP_460069.2 | transcriptional regulatory protein YedW | Not tested | SPI-5 | Protein | 1e-32 | 42 |
| copR | AAC33719.1 | regulatory protein CopR | Not tested | SPI-5 | Protein | 1e-31 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Clst_1392 | YP_007679470.1 | response regulator | NC_010079.5776364.p0 | Protein | 5e-44 | 55 |
| Clst_1392 | YP_007679470.1 | response regulator | NC_002952.2859858.p0 | Protein | 5e-44 | 55 |
| Clst_1392 | YP_007679470.1 | response regulator | NC_007622.3794948.p0 | Protein | 5e-44 | 55 |
| Clst_1392 | YP_007679470.1 | response regulator | NC_003923.1003417.p0 | Protein | 5e-44 | 55 |
| Clst_1392 | YP_007679470.1 | response regulator | NC_013450.8614146.p0 | Protein | 5e-44 | 55 |
| Clst_1392 | YP_007679470.1 | response regulator | NC_002951.3238224.p0 | Protein | 5e-44 | 55 |
| Clst_1392 | YP_007679470.1 | response regulator | NC_007793.3914065.p0 | Protein | 5e-44 | 55 |
| Clst_1392 | YP_007679470.1 | response regulator | NC_002758.1121390.p0 | Protein | 5e-44 | 55 |
| Clst_1392 | YP_007679470.1 | response regulator | HE999704.1.gene1528. | Protein | 2e-45 | 55 |
| Clst_1392 | YP_007679470.1 | response regulator | AE015929.1.gene1106. | Protein | 1e-39 | 52 |
| Clst_1392 | YP_007679470.1 | response regulator | NC_012469.1.7685629. | Protein | 5e-36 | 45 |
| Clst_1392 | YP_007679470.1 | response regulator | BAC0125 | Protein | 1e-34 | 44 |
| Clst_1392 | YP_007679470.1 | response regulator | BAC0197 | Protein | 3e-34 | 43 |
| Clst_1392 | YP_007679470.1 | response regulator | HE999704.1.gene2815. | Protein | 8e-36 | 43 |
| Clst_1392 | YP_007679470.1 | response regulator | BAC0347 | Protein | 4e-29 | 42 |
| Clst_1392 | YP_007679470.1 | response regulator | BAC0083 | Protein | 5e-34 | 42 |
| Clst_1392 | YP_007679470.1 | response regulator | BAC0308 | Protein | 6e-33 | 42 |
| Clst_1392 | YP_007679470.1 | response regulator | NC_003923.1003749.p0 | Protein | 2e-34 | 42 |
| Clst_1392 | YP_007679470.1 | response regulator | NC_002758.1121668.p0 | Protein | 2e-34 | 42 |
| Clst_1392 | YP_007679470.1 | response regulator | NC_009641.5332272.p0 | Protein | 2e-34 | 42 |
| Clst_1392 | YP_007679470.1 | response regulator | NC_013450.8614421.p0 | Protein | 2e-34 | 42 |
| Clst_1392 | YP_007679470.1 | response regulator | NC_007793.3914279.p0 | Protein | 2e-34 | 42 |
| Clst_1392 | YP_007679470.1 | response regulator | NC_002745.1124361.p0 | Protein | 2e-34 | 42 |
| Clst_1392 | YP_007679470.1 | response regulator | NC_009782.5559369.p0 | Protein | 2e-34 | 42 |
| Clst_1392 | YP_007679470.1 | response regulator | NC_002951.3237708.p0 | Protein | 2e-34 | 42 |
| Clst_1392 | YP_007679470.1 | response regulator | AE000516.2.gene3505. | Protein | 2e-27 | 42 |
| Clst_1392 | YP_007679470.1 | response regulator | FJ349556.1.orf0.gene | Protein | 2e-28 | 41 |
| Clst_1392 | YP_007679470.1 | response regulator | NC_002952.2859905.p0 | Protein | 4e-34 | 41 |
| Clst_1392 | YP_007679470.1 | response regulator | NC_007622.3794472.p0 | Protein | 3e-34 | 41 |
| Clst_1392 | YP_007679470.1 | response regulator | BAC0638 | Protein | 1e-27 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Clst_1392 | YP_007679470.1 | response regulator | VFG1390 | Protein | 2e-37 | 44 |
| Clst_1392 | YP_007679470.1 | response regulator | VFG1389 | Protein | 2e-37 | 43 |
| Clst_1392 | YP_007679470.1 | response regulator | VFG0596 | Protein | 5e-33 | 42 |
| Clst_1392 | YP_007679470.1 | response regulator | VFG0473 | Protein | 3e-25 | 41 |
