Gene Information

Name : Clst_1247 (Clst_1247)
Accession : YP_007679326.1
Strain : Clostridium stercorarium DSM 8532
Genome accession: NC_020887
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1399068 - 1400288 bp
Length : 1221 bp
Strand : +
Note : or inactivated derivative; COG:3328 Transposase and inactivated derivatives

DNA sequence :
GTGGCTACTAATAATAGAATGGCACTTTTAGAACAACTTAGCAAGTATGTTGTTGAAAAAGATAAAGATTTTTTAAAAGA
AGCATTAACATTACTCATTAATGCCCTAATGGATGCGGAAGTTACATCAATAATAGGTGCTGAAAAGTATGAAAGAAATG
ATAGTAGAAACAACTATCGCAATGGATATCGCCTAAGAGAATGGGATACTCGAGTAGGAACATTACAGTTAAGCATTCCC
AAGTTACGTCACGGAAGTTATTTTCCAAGTCTTTTAGAACCGAGGAAAATGTCAGAGAAAGCATTATTGAATGTAGTTCA
GGAAGCCTATGTTCATGGAGTAAGTACCAGGAAGGTGGATGAACTTGTAGAAGCTCTTGGAATGAAAGGGATTGATAAAA
GCGAAGTATCAAGAATCAGTAAGCAACTGGATGAATTTGTAGAAGAATTTAAAAACCGTAGACTGGAAGGAGAATATCCT
TACCTTTGGCTTGATGCCACTTTCCCCAAGGTTCGGGAAGGAGGCAGGGTATGCAGTATGGCACTAGTTATAGCAGTAGG
AGTTAATCAACAAGGTGAACGGGAAATATTAGGTTTTGATGTAGGGATGAGTGAAGACGGGGCTTTTTGGGAGGAGTTTT
TAAGAAGGCTGGTAGCAAGGGGTCTAAAAGGTGTAAGGCTTGTAATCAGTGATGCACATGAAGGGCTGAAGGCTGCAATA
AAGAAGATTTTAACGGGAAGTGCATGGCAAAGATGCCGTGTACATTTTATGAGAAATGTATTAAGCCAGGTACCAAAGCA
TTATCAGGGGATGGTATCATCGATAATACGGACAATATTTGCCCAGAATGATCAGGAATCTGCGAGGGAACAGTTAAGGC
ATGTAGTAGATGAGCTTAAAAATCGTTTTCCAAAAGCAATGAAAATTCTTGAAGAAGCAGAAGAAGAAATCCTGGCATAT
ATGGCTTTTCCTCGTGAGCATTGGGCACAGATACACTCTACCAATCCGCTGGAGAGACTTAACCGTGAAATTCGCCGTCG
AACGGATGTTGTTTGCATATTTCCAAATCGTGAGGCGGTAATCCGATTGGTAGGAGCAATGCTCATGGAACAAAATGATG
AATGGAAAGTAGGGCGGCGTTATTTCAGTTTGGAATCAATGTCAAAGATTACATCGATAAATGAATTTACATTGACGCCA
GTAGCTTTATTACATAAATGA

Protein sequence :
MATNNRMALLEQLSKYVVEKDKDFLKEALTLLINALMDAEVTSIIGAEKYERNDSRNNYRNGYRLREWDTRVGTLQLSIP
KLRHGSYFPSLLEPRKMSEKALLNVVQEAYVHGVSTRKVDELVEALGMKGIDKSEVSRISKQLDEFVEEFKNRRLEGEYP
YLWLDATFPKVREGGRVCSMALVIAVGVNQQGEREILGFDVGMSEDGAFWEEFLRRLVARGLKGVRLVISDAHEGLKAAI
KKILTGSAWQRCRVHFMRNVLSQVPKHYQGMVSSIIRTIFAQNDQESAREQLRHVVDELKNRFPKAMKILEEAEEEILAY
MAFPREHWAQIHSTNPLERLNREIRRRTDVVCIFPNREAVIRLVGAMLMEQNDEWKVGRRYFSLESMSKITSINEFTLTP
VALLHK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnp7109-24 YP_001800852.1 transposase for insertion sequence Not tested Not named Protein 1e-58 46
SERP1584 YP_189149.1 IS256-like transposase Not tested ¥ÕSP¥â Protein 5e-58 41
SERP1587 YP_189152.1 IS256-like transposase Not tested ¥ÕSP¥â Protein 5e-58 41
IS256 BAC22941.1 IS256 transposase Not tested etd PI Protein 4e-58 41
unnamed BAC67572.1 transposase for insertion sequence element IS256 in transposon Tn4001 Not tested Type-IVc SCCmec Protein 4e-58 41
unnamed BAC67574.1 transposase for insertion sequence element IS256 in transposon Tn4001 Not tested Type-IVc SCCmec Protein 4e-58 41
EF0529 NP_814305.1 IS256, transposase Not tested Not named Protein 5e-58 41